Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MMP13P45452 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.45■□□□□ 0.38
MMP13P45452 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.45■□□□□ 0.38
MMP13P45452 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
MMP13P45452 AL031284.1-201ENST00000419297 478 ntBASIC17.45■□□□□ 0.38
MMP13P45452 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.45■□□□□ 0.38
MMP13P45452 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.45■□□□□ 0.38
MMP13P45452 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.45■□□□□ 0.38
MMP13P45452 SLC25A6P4-201ENST00000586535 553 ntBASIC17.45■□□□□ 0.38
MMP13P45452 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.45■□□□□ 0.38
MMP13P45452 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
MMP13P45452 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
MMP13P45452 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.45■□□□□ 0.38
MMP13P45452 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MMP13P45452 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.45■□□□□ 0.38
MMP13P45452 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
MMP13P45452 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MMP13P45452 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
MMP13P45452 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MMP13P45452 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.45■□□□□ 0.38
MMP13P45452 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MMP13P45452 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MMP13P45452 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MMP13P45452 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MMP13P45452 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MMP13P45452 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
MMP13P45452 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.44■□□□□ 0.38
MMP13P45452 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.44■□□□□ 0.38
MMP13P45452 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MMP13P45452 FRMD8P1-201ENST00000440433 1524 ntBASIC17.44■□□□□ 0.38
MMP13P45452 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
MMP13P45452 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
MMP13P45452 AC073621.1-201ENST00000392730 636 ntBASIC17.44■□□□□ 0.38
MMP13P45452 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MMP13P45452 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
MMP13P45452 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
MMP13P45452 AC136632.2-201ENST00000512891 861 ntBASIC17.44■□□□□ 0.38
MMP13P45452 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.44■□□□□ 0.38
MMP13P45452 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.44■□□□□ 0.38
MMP13P45452 AC105339.3-201ENST00000560043 636 ntBASIC17.44■□□□□ 0.38
MMP13P45452 AC012640.2-201ENST00000561606 901 ntBASIC17.44■□□□□ 0.38
MMP13P45452 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.44■□□□□ 0.38
MMP13P45452 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.44■□□□□ 0.38
MMP13P45452 MIR1199-201ENST00000621445 119 ntBASIC17.44■□□□□ 0.38
MMP13P45452 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MMP13P45452 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
MMP13P45452 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
MMP13P45452 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MMP13P45452 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.44■□□□□ 0.38
MMP13P45452 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
MMP13P45452 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
MMP13P45452 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MMP13P45452 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.44■□□□□ 0.38
MMP13P45452 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MMP13P45452 HYMAI-201ENST00000635591 3347 ntBASIC17.44■□□□□ 0.38
MMP13P45452 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MMP13P45452 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
MMP13P45452 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
MMP13P45452 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC17.43■□□□□ 0.38
MMP13P45452 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
MMP13P45452 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC17.43■□□□□ 0.38
MMP13P45452 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
MMP13P45452 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.43■□□□□ 0.38
MMP13P45452 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MMP13P45452 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.43■□□□□ 0.38
MMP13P45452 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
MMP13P45452 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MMP13P45452 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.43■□□□□ 0.38
MMP13P45452 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
MMP13P45452 PTCHD3P3-201ENST00000403073 906 ntBASIC17.43■□□□□ 0.38
MMP13P45452 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MMP13P45452 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.43■□□□□ 0.38
MMP13P45452 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
MMP13P45452 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.43■□□□□ 0.38
MMP13P45452 AP001005.1-201ENST00000571755 1248 ntBASIC17.43■□□□□ 0.38
MMP13P45452 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.43■□□□□ 0.38
MMP13P45452 AL805961.1-202ENST00000641562 540 ntBASIC17.43■□□□□ 0.38
MMP13P45452 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
MMP13P45452 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.43■□□□□ 0.38
MMP13P45452 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MMP13P45452 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.43■□□□□ 0.38
MMP13P45452 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.43■□□□□ 0.38
MMP13P45452 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.43■□□□□ 0.38
MMP13P45452 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MMP13P45452 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
MMP13P45452 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC17.43■□□□□ 0.38
MMP13P45452 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MMP13P45452 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.43■□□□□ 0.38
MMP13P45452 AC243591.1-201ENST00000452967 1364 ntBASIC17.42■□□□□ 0.38
MMP13P45452 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MMP13P45452 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
MMP13P45452 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
MMP13P45452 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.42■□□□□ 0.38
MMP13P45452 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.42■□□□□ 0.38
MMP13P45452 HLA-A-202ENST00000376806 1854 ntBASIC17.42■□□□□ 0.38
MMP13P45452 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MMP13P45452 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MMP13P45452 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.42■□□□□ 0.38
MMP13P45452 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.42■□□□□ 0.38
MMP13P45452 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms