Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHRNA4P43681 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CHRNA4P43681 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.89■□□□□ 0.29
CHRNA4P43681 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHRNA4P43681 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHRNA4P43681 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CHRNA4P43681 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
CHRNA4P43681 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHRNA4P43681 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CHRNA4P43681 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CHRNA4P43681 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHRNA4P43681 KRT8P39-201ENST00000396270 1433 ntBASIC16.88■□□□□ 0.29
CHRNA4P43681 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHRNA4P43681 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.88■□□□□ 0.29
CHRNA4P43681 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.88■□□□□ 0.29
CHRNA4P43681 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.88■□□□□ 0.29
CHRNA4P43681 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.88■□□□□ 0.29
CHRNA4P43681 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHRNA4P43681 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CHRNA4P43681 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.88■□□□□ 0.29
CHRNA4P43681 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CHRNA4P43681 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.88■□□□□ 0.29
CHRNA4P43681 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHRNA4P43681 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
CHRNA4P43681 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CHRNA4P43681 AC012569.1-201ENST00000591191 1524 ntBASIC16.88■□□□□ 0.29
CHRNA4P43681 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHRNA4P43681 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.88■□□□□ 0.29
CHRNA4P43681 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHRNA4P43681 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CHRNA4P43681 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
CHRNA4P43681 HCG4-201ENST00000418983 998 ntBASIC16.88■□□□□ 0.29
CHRNA4P43681 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.88■□□□□ 0.29
CHRNA4P43681 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
CHRNA4P43681 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.88■□□□□ 0.29
CHRNA4P43681 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHRNA4P43681 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.88■□□□□ 0.29
CHRNA4P43681 AC064836.3-201ENST00000607928 673 ntBASIC16.88■□□□□ 0.29
CHRNA4P43681 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.88■□□□□ 0.29
CHRNA4P43681 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHRNA4P43681 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHRNA4P43681 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.88■□□□□ 0.29
CHRNA4P43681 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.88■□□□□ 0.29
CHRNA4P43681 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHRNA4P43681 TNRC18P3-201ENST00000441896 2691 ntBASIC16.88■□□□□ 0.29
CHRNA4P43681 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.88■□□□□ 0.29
CHRNA4P43681 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHRNA4P43681 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CHRNA4P43681 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHRNA4P43681 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHRNA4P43681 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CHRNA4P43681 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHRNA4P43681 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.88■□□□□ 0.29
CHRNA4P43681 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CHRNA4P43681 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHRNA4P43681 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHRNA4P43681 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.87■□□□□ 0.29
CHRNA4P43681 AL031731.1-201ENST00000642131 2094 ntBASIC16.87■□□□□ 0.29
CHRNA4P43681 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHRNA4P43681 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CHRNA4P43681 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.87■□□□□ 0.29
CHRNA4P43681 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
CHRNA4P43681 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHRNA4P43681 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHRNA4P43681 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHRNA4P43681 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
CHRNA4P43681 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.87■□□□□ 0.29
CHRNA4P43681 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHRNA4P43681 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.87■□□□□ 0.29
CHRNA4P43681 HMGA1P7-201ENST00000406908 502 ntBASIC16.87■□□□□ 0.29
CHRNA4P43681 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.87■□□□□ 0.29
CHRNA4P43681 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.87■□□□□ 0.29
CHRNA4P43681 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.87■□□□□ 0.29
CHRNA4P43681 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
CHRNA4P43681 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHRNA4P43681 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.87■□□□□ 0.29
CHRNA4P43681 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHRNA4P43681 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CHRNA4P43681 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHRNA4P43681 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
CHRNA4P43681 GGT4P-201ENST00000623672 1708 ntBASIC16.87■□□□□ 0.29
CHRNA4P43681 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHRNA4P43681 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHRNA4P43681 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHRNA4P43681 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHRNA4P43681 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHRNA4P43681 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHRNA4P43681 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CHRNA4P43681 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.86■□□□□ 0.29
CHRNA4P43681 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CHRNA4P43681 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHRNA4P43681 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.86■□□□□ 0.29
CHRNA4P43681 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHRNA4P43681 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHRNA4P43681 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHRNA4P43681 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHRNA4P43681 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.86■□□□□ 0.29
CHRNA4P43681 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.86■□□□□ 0.29
CHRNA4P43681 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CHRNA4P43681 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms