Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATP6V1AP38606 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC21.13■□□□□ 0.97
ATP6V1AP38606 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC21.13■□□□□ 0.97
ATP6V1AP38606 TUBB8P12-201ENST00000308911 1335 ntBASIC21.13■□□□□ 0.97
ATP6V1AP38606 TUBB7P-202ENST00000428444 1305 ntBASIC21.13■□□□□ 0.97
ATP6V1AP38606 TUBB8P7-204ENST00000567960 1332 ntBASIC21.13■□□□□ 0.97
ATP6V1AP38606 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
ATP6V1AP38606 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATP6V1AP38606 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATP6V1AP38606 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATP6V1AP38606 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC21.13■□□□□ 0.97
ATP6V1AP38606 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC21.13■□□□□ 0.97
ATP6V1AP38606 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
ATP6V1AP38606 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC21.13■□□□□ 0.97
ATP6V1AP38606 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC21.13■□□□□ 0.97
ATP6V1AP38606 KRT17P8-201ENST00000540749 863 ntBASIC21.13■□□□□ 0.97
ATP6V1AP38606 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC21.13■□□□□ 0.97
ATP6V1AP38606 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC21.13■□□□□ 0.97
ATP6V1AP38606 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC21.13■□□□□ 0.97
ATP6V1AP38606 AC013467.2-201ENST00000605472 835 ntBASIC21.13■□□□□ 0.97
ATP6V1AP38606 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATP6V1AP38606 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
ATP6V1AP38606 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
ATP6V1AP38606 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATP6V1AP38606 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATP6V1AP38606 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATP6V1AP38606 AC008764.6-201ENST00000595909 2069 ntBASIC21.13■□□□□ 0.97
ATP6V1AP38606 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATP6V1AP38606 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC21.12■□□□□ 0.97
ATP6V1AP38606 LINC02012-201ENST00000608206 1725 ntBASIC21.12■□□□□ 0.97
ATP6V1AP38606 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ATP6V1AP38606 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ATP6V1AP38606 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC21.12■□□□□ 0.97
ATP6V1AP38606 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATP6V1AP38606 SLC7A15P-201ENST00000424028 1363 ntBASIC21.12■□□□□ 0.97
ATP6V1AP38606 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC21.12■□□□□ 0.97
ATP6V1AP38606 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC21.12■□□□□ 0.97
ATP6V1AP38606 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ATP6V1AP38606 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC21.12■□□□□ 0.97
ATP6V1AP38606 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC21.12■□□□□ 0.97
ATP6V1AP38606 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC21.12■□□□□ 0.97
ATP6V1AP38606 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATP6V1AP38606 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATP6V1AP38606 PC-204ENST00000524491 1714 ntTSL 2 BASIC21.12■□□□□ 0.97
ATP6V1AP38606 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC21.12■□□□□ 0.97
ATP6V1AP38606 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATP6V1AP38606 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC21.12■□□□□ 0.97
ATP6V1AP38606 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATP6V1AP38606 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
ATP6V1AP38606 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATP6V1AP38606 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATP6V1AP38606 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATP6V1AP38606 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC21.11■□□□□ 0.97
ATP6V1AP38606 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
ATP6V1AP38606 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ATP6V1AP38606 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATP6V1AP38606 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
ATP6V1AP38606 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ATP6V1AP38606 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC21.11■□□□□ 0.97
ATP6V1AP38606 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
ATP6V1AP38606 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
ATP6V1AP38606 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATP6V1AP38606 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ATP6V1AP38606 AC114501.2-201ENST00000439631 535 ntBASIC21.11■□□□□ 0.97
ATP6V1AP38606 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC21.11■□□□□ 0.97
ATP6V1AP38606 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC21.11■□□□□ 0.97
ATP6V1AP38606 NAA38-207ENST00000576861 556 ntTSL 3 BASIC21.11■□□□□ 0.97
ATP6V1AP38606 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
ATP6V1AP38606 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC21.11■□□□□ 0.97
ATP6V1AP38606 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC21.11■□□□□ 0.97
ATP6V1AP38606 BOC-212ENST00000485230 2173 ntTSL 2 BASIC21.11■□□□□ 0.97
ATP6V1AP38606 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATP6V1AP38606 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
ATP6V1AP38606 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATP6V1AP38606 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ATP6V1AP38606 KRT8P39-201ENST00000396270 1433 ntBASIC21.11■□□□□ 0.97
ATP6V1AP38606 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATP6V1AP38606 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
ATP6V1AP38606 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ATP6V1AP38606 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
ATP6V1AP38606 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATP6V1AP38606 SNX33P1-201ENST00000592116 1762 ntBASIC21.1■□□□□ 0.97
ATP6V1AP38606 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ATP6V1AP38606 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC21.1■□□□□ 0.97
ATP6V1AP38606 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ATP6V1AP38606 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ATP6V1AP38606 MIR658-201ENST00000385210 100 ntBASIC21.1■□□□□ 0.97
ATP6V1AP38606 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATP6V1AP38606 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC21.1■□□□□ 0.97
ATP6V1AP38606 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC21.1■□□□□ 0.97
ATP6V1AP38606 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
ATP6V1AP38606 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATP6V1AP38606 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC21.1■□□□□ 0.97
ATP6V1AP38606 AC124947.2-201ENST00000547118 1133 ntBASIC21.1■□□□□ 0.97
ATP6V1AP38606 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC21.1■□□□□ 0.97
ATP6V1AP38606 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC21.1■□□□□ 0.97
ATP6V1AP38606 RAB43P1-201ENST00000561790 589 ntBASIC21.1■□□□□ 0.97
ATP6V1AP38606 AC106886.1-201ENST00000568660 600 ntBASIC21.1■□□□□ 0.97
ATP6V1AP38606 NAA38-206ENST00000576384 424 ntTSL 2 BASIC21.1■□□□□ 0.97
ATP6V1AP38606 MIR6805-201ENST00000615055 62 ntBASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms