Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 AC084018.2-201ENST00000613093 2607 ntBASIC17.36■□□□□ 0.37
SCNN1AP37088 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCNN1AP37088 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SCNN1AP37088 WASH6P-202ENST00000359512 1437 ntBASIC17.36■□□□□ 0.37
SCNN1AP37088 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SCNN1AP37088 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.36■□□□□ 0.37
SCNN1AP37088 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
SCNN1AP37088 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCNN1AP37088 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCNN1AP37088 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SCNN1AP37088 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.36■□□□□ 0.37
SCNN1AP37088 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCNN1AP37088 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCNN1AP37088 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.35■□□□□ 0.37
SCNN1AP37088 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SCNN1AP37088 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCNN1AP37088 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SCNN1AP37088 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.35■□□□□ 0.37
SCNN1AP37088 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.35■□□□□ 0.37
SCNN1AP37088 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCNN1AP37088 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCNN1AP37088 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SCNN1AP37088 MIR940-201ENST00000401276 94 ntBASIC17.35■□□□□ 0.37
SCNN1AP37088 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.35■□□□□ 0.37
SCNN1AP37088 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
SCNN1AP37088 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.35■□□□□ 0.37
SCNN1AP37088 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.35■□□□□ 0.37
SCNN1AP37088 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
SCNN1AP37088 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.35■□□□□ 0.37
SCNN1AP37088 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
SCNN1AP37088 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCNN1AP37088 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.35■□□□□ 0.37
SCNN1AP37088 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCNN1AP37088 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCNN1AP37088 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SCNN1AP37088 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCNN1AP37088 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SCNN1AP37088 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
SCNN1AP37088 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SCNN1AP37088 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCNN1AP37088 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCNN1AP37088 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
SCNN1AP37088 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCNN1AP37088 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
SCNN1AP37088 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SCNN1AP37088 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.34■□□□□ 0.37
SCNN1AP37088 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCNN1AP37088 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.34■□□□□ 0.37
SCNN1AP37088 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
SCNN1AP37088 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
SCNN1AP37088 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.34■□□□□ 0.37
SCNN1AP37088 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SCNN1AP37088 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCNN1AP37088 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
SCNN1AP37088 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SCNN1AP37088 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.34■□□□□ 0.37
SCNN1AP37088 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.34■□□□□ 0.37
SCNN1AP37088 MTDHP5-201ENST00000598980 586 ntBASIC17.34■□□□□ 0.37
SCNN1AP37088 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.34■□□□□ 0.37
SCNN1AP37088 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCNN1AP37088 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.34■□□□□ 0.37
SCNN1AP37088 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SCNN1AP37088 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.34■□□□□ 0.37
SCNN1AP37088 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.34■□□□□ 0.37
SCNN1AP37088 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.34■□□□□ 0.37
SCNN1AP37088 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCNN1AP37088 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SCNN1AP37088 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.34■□□□□ 0.37
SCNN1AP37088 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
SCNN1AP37088 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCNN1AP37088 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.34■□□□□ 0.37
SCNN1AP37088 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.33■□□□□ 0.37
SCNN1AP37088 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SCNN1AP37088 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SCNN1AP37088 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SCNN1AP37088 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
SCNN1AP37088 ALOX12P2-203ENST00000570921 1945 ntBASIC17.33■□□□□ 0.37
SCNN1AP37088 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.37
SCNN1AP37088 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.33■□□□□ 0.37
SCNN1AP37088 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
SCNN1AP37088 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.33■□□□□ 0.37
SCNN1AP37088 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
SCNN1AP37088 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SCNN1AP37088 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.33■□□□□ 0.37
SCNN1AP37088 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SCNN1AP37088 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
SCNN1AP37088 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
SCNN1AP37088 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.33■□□□□ 0.37
SCNN1AP37088 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SCNN1AP37088 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SCNN1AP37088 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
SCNN1AP37088 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.33■□□□□ 0.36
SCNN1AP37088 AKAP8P1-201ENST00000434743 1349 ntBASIC17.33■□□□□ 0.36
SCNN1AP37088 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
SCNN1AP37088 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.33■□□□□ 0.36
SCNN1AP37088 MKNK2P1-201ENST00000437526 628 ntBASIC17.33■□□□□ 0.36
SCNN1AP37088 ACTG1P14-201ENST00000446382 1122 ntBASIC17.33■□□□□ 0.36
SCNN1AP37088 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
SCNN1AP37088 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SCNN1AP37088 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms