Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
TNFSF4P23510 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TNFSF4P23510 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TNFSF4P23510 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC14.34□□□□□ -0.11
TNFSF4P23510 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.34□□□□□ -0.11
TNFSF4P23510 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
TNFSF4P23510 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
TNFSF4P23510 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
TNFSF4P23510 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.34□□□□□ -0.11
TNFSF4P23510 RHOQP3-201ENST00000437982 621 ntBASIC14.34□□□□□ -0.11
TNFSF4P23510 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TNFSF4P23510 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC14.34□□□□□ -0.11
TNFSF4P23510 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.34□□□□□ -0.11
TNFSF4P23510 AL031432.2-201ENST00000566714 459 ntBASIC14.34□□□□□ -0.11
TNFSF4P23510 AC018845.2-201ENST00000568326 409 ntBASIC14.34□□□□□ -0.11
TNFSF4P23510 AL928711.1-201ENST00000570165 459 ntBASIC14.34□□□□□ -0.11
TNFSF4P23510 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TNFSF4P23510 MIR4515-201ENST00000584082 81 ntBASIC14.34□□□□□ -0.11
TNFSF4P23510 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC14.34□□□□□ -0.11
TNFSF4P23510 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC14.34□□□□□ -0.11
TNFSF4P23510 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.34□□□□□ -0.11
TNFSF4P23510 AC004877.2-201ENST00000623941 599 ntBASIC14.34□□□□□ -0.11
TNFSF4P23510 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TNFSF4P23510 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TNFSF4P23510 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TNFSF4P23510 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TNFSF4P23510 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC14.34□□□□□ -0.11
TNFSF4P23510 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC14.34□□□□□ -0.11
TNFSF4P23510 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TNFSF4P23510 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TNFSF4P23510 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TNFSF4P23510 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TNFSF4P23510 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TNFSF4P23510 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
TNFSF4P23510 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
TNFSF4P23510 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TNFSF4P23510 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TNFSF4P23510 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TNFSF4P23510 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
TNFSF4P23510 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TNFSF4P23510 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
TNFSF4P23510 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC14.33□□□□□ -0.12
TNFSF4P23510 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
TNFSF4P23510 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TNFSF4P23510 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TNFSF4P23510 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
TNFSF4P23510 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TNFSF4P23510 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
TNFSF4P23510 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TNFSF4P23510 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
TNFSF4P23510 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TNFSF4P23510 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TNFSF4P23510 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
TNFSF4P23510 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TNFSF4P23510 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TNFSF4P23510 FABP5-202ENST00000396359 986 ntTSL 5 BASIC14.33□□□□□ -0.12
TNFSF4P23510 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.33□□□□□ -0.12
TNFSF4P23510 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC14.33□□□□□ -0.12
TNFSF4P23510 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC14.33□□□□□ -0.12
TNFSF4P23510 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC14.33□□□□□ -0.12
TNFSF4P23510 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TNFSF4P23510 DNAJB3-201ENST00000446806 729 ntBASIC14.33□□□□□ -0.12
TNFSF4P23510 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
TNFSF4P23510 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.33□□□□□ -0.12
TNFSF4P23510 MPDU1-223ENST00000582151 728 ntBASIC14.33□□□□□ -0.12
TNFSF4P23510 ACTL9-202ENST00000612068 1252 ntBASIC14.33□□□□□ -0.12
TNFSF4P23510 AQP6-205ENST00000618286 829 ntTSL 5 BASIC14.33□□□□□ -0.12
TNFSF4P23510 AC046158.3-201ENST00000624947 2558 ntBASIC14.33□□□□□ -0.12
TNFSF4P23510 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
TNFSF4P23510 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TNFSF4P23510 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
TNFSF4P23510 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TNFSF4P23510 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.33□□□□□ -0.12
TNFSF4P23510 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TNFSF4P23510 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
TNFSF4P23510 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TNFSF4P23510 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
TNFSF4P23510 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
TNFSF4P23510 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TNFSF4P23510 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TNFSF4P23510 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
TNFSF4P23510 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
TNFSF4P23510 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TNFSF4P23510 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TNFSF4P23510 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
TNFSF4P23510 AC131009.4-201ENST00000624048 1740 ntBASIC14.32□□□□□ -0.12
TNFSF4P23510 AC092068.3-201ENST00000587894 2016 ntBASIC14.32□□□□□ -0.12
TNFSF4P23510 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
TNFSF4P23510 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TNFSF4P23510 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TNFSF4P23510 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.32□□□□□ -0.12
TNFSF4P23510 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TNFSF4P23510 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC14.32□□□□□ -0.12
TNFSF4P23510 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TNFSF4P23510 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TNFSF4P23510 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
TNFSF4P23510 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC14.32□□□□□ -0.12
TNFSF4P23510 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TNFSF4P23510 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TNFSF4P23510 AP001094.4-201ENST00000579008 2176 ntBASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms