Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.21■□□□□ 0.35
ERCC2P18074 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ERCC2P18074 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
ERCC2P18074 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
ERCC2P18074 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ERCC2P18074 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
ERCC2P18074 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
ERCC2P18074 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ERCC2P18074 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.21■□□□□ 0.35
ERCC2P18074 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
ERCC2P18074 AL022342.1-201ENST00000400363 863 ntBASIC17.21■□□□□ 0.35
ERCC2P18074 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
ERCC2P18074 MED15P5-201ENST00000423150 992 ntBASIC17.21■□□□□ 0.35
ERCC2P18074 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.21■□□□□ 0.35
ERCC2P18074 AL591424.1-201ENST00000442569 1213 ntBASIC17.21■□□□□ 0.35
ERCC2P18074 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
ERCC2P18074 KRT18P3-201ENST00000451602 1288 ntBASIC17.21■□□□□ 0.35
ERCC2P18074 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
ERCC2P18074 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.21■□□□□ 0.35
ERCC2P18074 FAM197Y3-203ENST00000618346 717 ntBASIC17.21■□□□□ 0.35
ERCC2P18074 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
ERCC2P18074 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ERCC2P18074 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
ERCC2P18074 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.21■□□□□ 0.35
ERCC2P18074 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ERCC2P18074 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.21■□□□□ 0.34
ERCC2P18074 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
ERCC2P18074 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.34
ERCC2P18074 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.21■□□□□ 0.34
ERCC2P18074 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
ERCC2P18074 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.2■□□□□ 0.34
ERCC2P18074 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ERCC2P18074 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
ERCC2P18074 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ERCC2P18074 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ERCC2P18074 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.2■□□□□ 0.34
ERCC2P18074 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
ERCC2P18074 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ERCC2P18074 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ERCC2P18074 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
ERCC2P18074 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.2■□□□□ 0.34
ERCC2P18074 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
ERCC2P18074 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
ERCC2P18074 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
ERCC2P18074 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ERCC2P18074 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ERCC2P18074 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
ERCC2P18074 ALOX12P2-203ENST00000570921 1945 ntBASIC17.2■□□□□ 0.34
ERCC2P18074 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.2■□□□□ 0.34
ERCC2P18074 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
ERCC2P18074 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
ERCC2P18074 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ERCC2P18074 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ERCC2P18074 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.2■□□□□ 0.34
ERCC2P18074 RNA5SP416-201ENST00000516838 111 ntBASIC17.2■□□□□ 0.34
ERCC2P18074 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.2■□□□□ 0.34
ERCC2P18074 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.2■□□□□ 0.34
ERCC2P18074 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.2■□□□□ 0.34
ERCC2P18074 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.2■□□□□ 0.34
ERCC2P18074 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ERCC2P18074 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
ERCC2P18074 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ERCC2P18074 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ERCC2P18074 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ERCC2P18074 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ERCC2P18074 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ERCC2P18074 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
ERCC2P18074 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
ERCC2P18074 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ERCC2P18074 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ERCC2P18074 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ERCC2P18074 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ERCC2P18074 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ERCC2P18074 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ERCC2P18074 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.2■□□□□ 0.34
ERCC2P18074 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
ERCC2P18074 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
ERCC2P18074 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.19■□□□□ 0.34
ERCC2P18074 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ERCC2P18074 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ERCC2P18074 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ERCC2P18074 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.19■□□□□ 0.34
ERCC2P18074 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.19■□□□□ 0.34
ERCC2P18074 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
ERCC2P18074 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ERCC2P18074 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ERCC2P18074 GGT4P-201ENST00000623672 1708 ntBASIC17.19■□□□□ 0.34
ERCC2P18074 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.19■□□□□ 0.34
ERCC2P18074 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.19■□□□□ 0.34
ERCC2P18074 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ERCC2P18074 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ERCC2P18074 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
ERCC2P18074 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
ERCC2P18074 RNU1-129P-201ENST00000384064 167 ntBASIC17.19■□□□□ 0.34
ERCC2P18074 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
ERCC2P18074 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.19■□□□□ 0.34
ERCC2P18074 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
ERCC2P18074 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.19■□□□□ 0.34
ERCC2P18074 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.19■□□□□ 0.34
ERCC2P18074 KRT19P2-202ENST00000557173 1012 ntBASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms