Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.37■□□□□ 0.21
PCNAP12004 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCNAP12004 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCNAP12004 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
PCNAP12004 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCNAP12004 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
PCNAP12004 AP002414.1-201ENST00000391405 1147 ntBASIC16.37■□□□□ 0.21
PCNAP12004 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.37■□□□□ 0.21
PCNAP12004 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.37■□□□□ 0.21
PCNAP12004 RPS2P1-201ENST00000434010 821 ntBASIC16.37■□□□□ 0.21
PCNAP12004 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.37■□□□□ 0.21
PCNAP12004 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.37■□□□□ 0.21
PCNAP12004 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCNAP12004 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.37■□□□□ 0.21
PCNAP12004 AC004706.3-202ENST00000621574 984 ntBASIC16.37■□□□□ 0.21
PCNAP12004 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.37■□□□□ 0.21
PCNAP12004 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
PCNAP12004 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCNAP12004 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCNAP12004 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCNAP12004 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCNAP12004 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCNAP12004 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.37■□□□□ 0.21
PCNAP12004 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCNAP12004 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.37■□□□□ 0.21
PCNAP12004 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCNAP12004 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCNAP12004 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCNAP12004 PKD1P5-201ENST00000532415 10291 ntBASIC16.36■□□□□ 0.21
PCNAP12004 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.36■□□□□ 0.21
PCNAP12004 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.36■□□□□ 0.21
PCNAP12004 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCNAP12004 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCNAP12004 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.36■□□□□ 0.21
PCNAP12004 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.36■□□□□ 0.21
PCNAP12004 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCNAP12004 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.36■□□□□ 0.21
PCNAP12004 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCNAP12004 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCNAP12004 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.36■□□□□ 0.21
PCNAP12004 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.36■□□□□ 0.21
PCNAP12004 AC132872.4-202ENST00000622924 2756 ntBASIC16.36■□□□□ 0.21
PCNAP12004 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCNAP12004 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCNAP12004 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCNAP12004 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.36■□□□□ 0.21
PCNAP12004 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCNAP12004 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.36■□□□□ 0.21
PCNAP12004 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCNAP12004 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.36■□□□□ 0.21
PCNAP12004 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.36■□□□□ 0.21
PCNAP12004 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCNAP12004 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.36■□□□□ 0.21
PCNAP12004 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.36■□□□□ 0.21
PCNAP12004 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.36■□□□□ 0.21
PCNAP12004 OR7E14P-202ENST00000530490 1290 ntBASIC16.36■□□□□ 0.21
PCNAP12004 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.36■□□□□ 0.21
PCNAP12004 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.36■□□□□ 0.21
PCNAP12004 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCNAP12004 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.36■□□□□ 0.21
PCNAP12004 TERC-201ENST00000602385 541 ntBASIC16.36■□□□□ 0.21
PCNAP12004 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.36■□□□□ 0.21
PCNAP12004 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.36■□□□□ 0.21
PCNAP12004 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCNAP12004 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCNAP12004 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCNAP12004 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCNAP12004 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCNAP12004 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.36■□□□□ 0.21
PCNAP12004 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCNAP12004 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.36■□□□□ 0.21
PCNAP12004 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCNAP12004 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
PCNAP12004 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCNAP12004 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCNAP12004 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCNAP12004 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCNAP12004 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCNAP12004 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCNAP12004 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCNAP12004 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.35■□□□□ 0.21
PCNAP12004 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.35■□□□□ 0.21
PCNAP12004 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCNAP12004 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCNAP12004 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCNAP12004 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCNAP12004 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.35■□□□□ 0.21
PCNAP12004 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCNAP12004 AC006504.4-201ENST00000592118 1568 ntBASIC16.35■□□□□ 0.21
PCNAP12004 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCNAP12004 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
PCNAP12004 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCNAP12004 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCNAP12004 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.35■□□□□ 0.21
PCNAP12004 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCNAP12004 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.35■□□□□ 0.21
PCNAP12004 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCNAP12004 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCNAP12004 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
PCNAP12004 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms