Protein–RNA interactions for Protein: P10909

CLU, Clusterin, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLUP10909 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLUP10909 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLUP10909 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.16■□□□□ 0.02
CLUP10909 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.16■□□□□ 0.02
CLUP10909 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLUP10909 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLUP10909 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLUP10909 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLUP10909 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.16■□□□□ 0.02
CLUP10909 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLUP10909 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLUP10909 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLUP10909 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLUP10909 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CLUP10909 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLUP10909 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.16■□□□□ 0.02
CLUP10909 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLUP10909 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.16■□□□□ 0.02
CLUP10909 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC15.16■□□□□ 0.02
CLUP10909 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLUP10909 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLUP10909 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CLUP10909 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15.16■□□□□ 0.02
CLUP10909 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
CLUP10909 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.16■□□□□ 0.02
CLUP10909 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.16■□□□□ 0.02
CLUP10909 AC087388.1-201ENST00000571370 1112 ntBASIC15.16■□□□□ 0.02
CLUP10909 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC15.16■□□□□ 0.02
CLUP10909 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC15.16■□□□□ 0.02
CLUP10909 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
CLUP10909 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLUP10909 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLUP10909 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLUP10909 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.16■□□□□ 0.02
CLUP10909 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLUP10909 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.16■□□□□ 0.02
CLUP10909 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLUP10909 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC15.16■□□□□ 0.02
CLUP10909 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLUP10909 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
CLUP10909 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLUP10909 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLUP10909 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLUP10909 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLUP10909 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.16■□□□□ 0.02
CLUP10909 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
CLUP10909 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.16■□□□□ 0.02
CLUP10909 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.16■□□□□ 0.02
CLUP10909 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
CLUP10909 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLUP10909 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLUP10909 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.15■□□□□ 0.02
CLUP10909 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.15■□□□□ 0.02
CLUP10909 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLUP10909 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLUP10909 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.15■□□□□ 0.02
CLUP10909 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLUP10909 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLUP10909 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLUP10909 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLUP10909 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CLUP10909 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.15■□□□□ 0.02
CLUP10909 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CLUP10909 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLUP10909 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLUP10909 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CLUP10909 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLUP10909 SOD2-201ENST00000337404 991 ntTSL 2 BASIC15.15■□□□□ 0.02
CLUP10909 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLUP10909 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
CLUP10909 AP002414.1-201ENST00000391405 1147 ntBASIC15.15■□□□□ 0.02
CLUP10909 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CLUP10909 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLUP10909 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CLUP10909 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.15■□□□□ 0.02
CLUP10909 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC15.15■□□□□ 0.02
CLUP10909 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC15.15■□□□□ 0.02
CLUP10909 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLUP10909 AC104819.1-201ENST00000504587 486 ntBASIC15.15■□□□□ 0.02
CLUP10909 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLUP10909 AC099336.1-202ENST00000602961 463 ntBASIC15.15■□□□□ 0.02
CLUP10909 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CLUP10909 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CLUP10909 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLUP10909 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLUP10909 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLUP10909 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.15■□□□□ 0.02
CLUP10909 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLUP10909 SIGLEC16-201ENST00000599858 1437 ntBASIC15.15■□□□□ 0.02
CLUP10909 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.15■□□□□ 0.02
CLUP10909 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLUP10909 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLUP10909 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
CLUP10909 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CLUP10909 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLUP10909 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLUP10909 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CLUP10909 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLUP10909 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CLUP10909 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms