Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
COL5A2P05997 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
COL5A2P05997 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
COL5A2P05997 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
COL5A2P05997 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC21.66■■□□□ 1.06
COL5A2P05997 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
COL5A2P05997 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
COL5A2P05997 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
COL5A2P05997 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
COL5A2P05997 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC21.66■■□□□ 1.06
COL5A2P05997 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC21.66■■□□□ 1.06
COL5A2P05997 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
COL5A2P05997 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
COL5A2P05997 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC21.65■■□□□ 1.06
COL5A2P05997 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
COL5A2P05997 MIR1908-201ENST00000410394 80 ntBASIC21.65■■□□□ 1.06
COL5A2P05997 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
COL5A2P05997 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
COL5A2P05997 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC21.65■■□□□ 1.06
COL5A2P05997 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC21.65■■□□□ 1.06
COL5A2P05997 RARRES2P5-201ENST00000564013 466 ntBASIC21.65■■□□□ 1.06
COL5A2P05997 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC21.65■■□□□ 1.06
COL5A2P05997 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
COL5A2P05997 TECR-220ENST00000600083 1204 ntTSL 2 BASIC21.65■■□□□ 1.06
COL5A2P05997 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC21.65■■□□□ 1.06
COL5A2P05997 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
COL5A2P05997 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
COL5A2P05997 PCDHB17P-201ENST00000539533 2393 ntBASIC21.65■■□□□ 1.06
COL5A2P05997 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
COL5A2P05997 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
COL5A2P05997 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
COL5A2P05997 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
COL5A2P05997 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
COL5A2P05997 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
COL5A2P05997 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
COL5A2P05997 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC21.65■■□□□ 1.06
COL5A2P05997 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
COL5A2P05997 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
COL5A2P05997 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
COL5A2P05997 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC21.65■■□□□ 1.06
COL5A2P05997 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
COL5A2P05997 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
COL5A2P05997 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
COL5A2P05997 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
COL5A2P05997 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
COL5A2P05997 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.06
COL5A2P05997 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
COL5A2P05997 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
COL5A2P05997 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC21.64■■□□□ 1.06
COL5A2P05997 AL139010.1-201ENST00000454878 894 ntBASIC21.64■■□□□ 1.06
COL5A2P05997 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.06
COL5A2P05997 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC21.64■■□□□ 1.06
COL5A2P05997 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC21.64■■□□□ 1.06
COL5A2P05997 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
COL5A2P05997 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
COL5A2P05997 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC21.64■■□□□ 1.06
COL5A2P05997 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
COL5A2P05997 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
COL5A2P05997 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
COL5A2P05997 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
COL5A2P05997 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
COL5A2P05997 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
COL5A2P05997 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
COL5A2P05997 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC21.64■■□□□ 1.05
COL5A2P05997 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
COL5A2P05997 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
COL5A2P05997 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC21.64■■□□□ 1.05
COL5A2P05997 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
COL5A2P05997 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
COL5A2P05997 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
COL5A2P05997 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
COL5A2P05997 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC21.64■■□□□ 1.05
COL5A2P05997 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
COL5A2P05997 ACTBP11-201ENST00000436287 1126 ntBASIC21.64■■□□□ 1.05
COL5A2P05997 MIR5189-201ENST00000577370 114 ntBASIC21.64■■□□□ 1.05
COL5A2P05997 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC21.64■■□□□ 1.05
COL5A2P05997 AC233724.13-201ENST00000598383 410 ntBASIC21.64■■□□□ 1.05
COL5A2P05997 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC21.63■■□□□ 1.05
COL5A2P05997 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC21.63■■□□□ 1.05
COL5A2P05997 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
COL5A2P05997 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC21.63■■□□□ 1.05
COL5A2P05997 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
COL5A2P05997 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
COL5A2P05997 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
COL5A2P05997 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
COL5A2P05997 PDIA3P1-201ENST00000471856 1510 ntBASIC21.63■■□□□ 1.05
COL5A2P05997 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
COL5A2P05997 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
COL5A2P05997 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
COL5A2P05997 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
COL5A2P05997 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC21.63■■□□□ 1.05
COL5A2P05997 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
COL5A2P05997 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
COL5A2P05997 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC21.63■■□□□ 1.05
COL5A2P05997 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC21.63■■□□□ 1.05
COL5A2P05997 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC21.63■■□□□ 1.05
COL5A2P05997 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC21.63■■□□□ 1.05
COL5A2P05997 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC21.63■■□□□ 1.05
COL5A2P05997 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
COL5A2P05997 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms