Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.82■□□□□ 0.12
SNX4O95219 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SNX4O95219 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.82■□□□□ 0.12
SNX4O95219 AL022342.1-201ENST00000400363 863 ntBASIC15.82■□□□□ 0.12
SNX4O95219 LINC00982-205ENST00000420957 435 ntBASIC15.82■□□□□ 0.12
SNX4O95219 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.82■□□□□ 0.12
SNX4O95219 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC15.82■□□□□ 0.12
SNX4O95219 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.82■□□□□ 0.12
SNX4O95219 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SNX4O95219 AC012640.2-201ENST00000561606 901 ntBASIC15.82■□□□□ 0.12
SNX4O95219 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
SNX4O95219 AL356488.2-201ENST00000602755 427 ntBASIC15.82■□□□□ 0.12
SNX4O95219 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC15.82■□□□□ 0.12
SNX4O95219 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC15.82■□□□□ 0.12
SNX4O95219 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SNX4O95219 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
SNX4O95219 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.82■□□□□ 0.12
SNX4O95219 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.82■□□□□ 0.12
SNX4O95219 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SNX4O95219 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SNX4O95219 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.82■□□□□ 0.12
SNX4O95219 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SNX4O95219 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SNX4O95219 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SNX4O95219 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SNX4O95219 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SNX4O95219 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SNX4O95219 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SNX4O95219 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.81■□□□□ 0.12
SNX4O95219 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
SNX4O95219 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SNX4O95219 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SNX4O95219 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
SNX4O95219 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SNX4O95219 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SNX4O95219 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SNX4O95219 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SNX4O95219 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SNX4O95219 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SNX4O95219 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SNX4O95219 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.81■□□□□ 0.12
SNX4O95219 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
SNX4O95219 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SNX4O95219 AC073621.1-201ENST00000392730 636 ntBASIC15.81■□□□□ 0.12
SNX4O95219 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SNX4O95219 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SNX4O95219 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SNX4O95219 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
SNX4O95219 IGHV3-22-201ENST00000520721 359 ntBASIC15.81■□□□□ 0.12
SNX4O95219 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.81■□□□□ 0.12
SNX4O95219 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.81■□□□□ 0.12
SNX4O95219 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC15.81■□□□□ 0.12
SNX4O95219 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SNX4O95219 AL353135.1-201ENST00000606729 504 ntBASIC15.81■□□□□ 0.12
SNX4O95219 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.81■□□□□ 0.12
SNX4O95219 HYMAI-201ENST00000635591 3347 ntBASIC15.81■□□□□ 0.12
SNX4O95219 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.81■□□□□ 0.12
SNX4O95219 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
SNX4O95219 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SNX4O95219 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.81■□□□□ 0.12
SNX4O95219 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SNX4O95219 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SNX4O95219 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SNX4O95219 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.8■□□□□ 0.12
SNX4O95219 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNX4O95219 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.8■□□□□ 0.12
SNX4O95219 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNX4O95219 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
SNX4O95219 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNX4O95219 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNX4O95219 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SNX4O95219 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNX4O95219 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNX4O95219 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNX4O95219 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SNX4O95219 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.8■□□□□ 0.12
SNX4O95219 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SNX4O95219 GPR89P-201ENST00000407924 1495 ntBASIC15.8■□□□□ 0.12
SNX4O95219 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNX4O95219 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SNX4O95219 ZNF259P1-201ENST00000407656 1365 ntBASIC15.8■□□□□ 0.12
SNX4O95219 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
SNX4O95219 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNX4O95219 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
SNX4O95219 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.8■□□□□ 0.12
SNX4O95219 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.8■□□□□ 0.12
SNX4O95219 AC098831.1-202ENST00000438821 336 ntBASIC15.8■□□□□ 0.12
SNX4O95219 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.8■□□□□ 0.12
SNX4O95219 RPL13AP23-201ENST00000480739 586 ntBASIC15.8■□□□□ 0.12
SNX4O95219 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.8■□□□□ 0.12
SNX4O95219 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.8■□□□□ 0.12
SNX4O95219 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SNX4O95219 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.8■□□□□ 0.12
SNX4O95219 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.8■□□□□ 0.12
SNX4O95219 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC15.8■□□□□ 0.12
SNX4O95219 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.8■□□□□ 0.12
SNX4O95219 WDR88-203ENST00000592765 651 ntTSL 5 BASIC15.8■□□□□ 0.12
SNX4O95219 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.8■□□□□ 0.12
SNX4O95219 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.8■□□□□ 0.12
SNX4O95219 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms