Protein–RNA interactions for Protein: O75909

CCNK, Cyclin-K, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNKO75909 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.56□□□□□ -0.08
CCNKO75909 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CCNKO75909 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
CCNKO75909 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.56□□□□□ -0.08
CCNKO75909 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCNKO75909 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCNKO75909 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.56□□□□□ -0.08
CCNKO75909 AC107918.4-201ENST00000641966 3141 ntBASIC14.56□□□□□ -0.08
CCNKO75909 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC14.56□□□□□ -0.08
CCNKO75909 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.56□□□□□ -0.08
CCNKO75909 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCNKO75909 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCNKO75909 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
CCNKO75909 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CCNKO75909 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CCNKO75909 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC14.55□□□□□ -0.08
CCNKO75909 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCNKO75909 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCNKO75909 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.55□□□□□ -0.08
CCNKO75909 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CCNKO75909 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCNKO75909 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCNKO75909 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCNKO75909 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC14.55□□□□□ -0.08
CCNKO75909 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCNKO75909 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
CCNKO75909 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
CCNKO75909 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCNKO75909 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCNKO75909 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCNKO75909 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCNKO75909 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
CCNKO75909 RPS2P4-201ENST00000476944 856 ntBASIC14.55□□□□□ -0.08
CCNKO75909 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CCNKO75909 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC14.55□□□□□ -0.08
CCNKO75909 AL139327.4-201ENST00000612362 153 ntBASIC14.55□□□□□ -0.08
CCNKO75909 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC14.55□□□□□ -0.08
CCNKO75909 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC14.55□□□□□ -0.08
CCNKO75909 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC14.55□□□□□ -0.08
CCNKO75909 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CCNKO75909 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CCNKO75909 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CCNKO75909 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CCNKO75909 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCNKO75909 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC14.55□□□□□ -0.08
CCNKO75909 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC14.55□□□□□ -0.08
CCNKO75909 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC14.55□□□□□ -0.08
CCNKO75909 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC14.55□□□□□ -0.08
CCNKO75909 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCNKO75909 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCNKO75909 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC14.55□□□□□ -0.08
CCNKO75909 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.55□□□□□ -0.08
CCNKO75909 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC14.55□□□□□ -0.08
CCNKO75909 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCNKO75909 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.55□□□□□ -0.08
CCNKO75909 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.55□□□□□ -0.08
CCNKO75909 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCNKO75909 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCNKO75909 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCNKO75909 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CCNKO75909 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CCNKO75909 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.55□□□□□ -0.08
CCNKO75909 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.55□□□□□ -0.08
CCNKO75909 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
CCNKO75909 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CCNKO75909 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCNKO75909 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCNKO75909 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CCNKO75909 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCNKO75909 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.54□□□□□ -0.08
CCNKO75909 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.54□□□□□ -0.08
CCNKO75909 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCNKO75909 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCNKO75909 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.54□□□□□ -0.08
CCNKO75909 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCNKO75909 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CCNKO75909 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CCNKO75909 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC14.54□□□□□ -0.08
CCNKO75909 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
CCNKO75909 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCNKO75909 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CCNKO75909 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCNKO75909 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCNKO75909 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
CCNKO75909 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC14.54□□□□□ -0.08
CCNKO75909 NIFKP9-201ENST00000419265 221 ntBASIC14.54□□□□□ -0.08
CCNKO75909 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC14.54□□□□□ -0.08
CCNKO75909 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC14.54□□□□□ -0.08
CCNKO75909 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC14.54□□□□□ -0.08
CCNKO75909 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
CCNKO75909 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC14.54□□□□□ -0.08
CCNKO75909 AC133041.1-202ENST00000642053 222 ntBASIC14.54□□□□□ -0.08
CCNKO75909 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
CCNKO75909 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC14.54□□□□□ -0.08
CCNKO75909 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CCNKO75909 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCNKO75909 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CCNKO75909 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC14.54□□□□□ -0.08
CCNKO75909 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CCNKO75909 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms