Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.84■□□□□ 0.29
RFPL1O75677 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RFPL1O75677 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.84■□□□□ 0.29
RFPL1O75677 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.84■□□□□ 0.29
RFPL1O75677 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.84■□□□□ 0.29
RFPL1O75677 AC092865.5-201ENST00000545435 363 ntBASIC16.84■□□□□ 0.29
RFPL1O75677 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RFPL1O75677 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.84■□□□□ 0.29
RFPL1O75677 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.84■□□□□ 0.29
RFPL1O75677 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.84■□□□□ 0.29
RFPL1O75677 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RFPL1O75677 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.84■□□□□ 0.29
RFPL1O75677 AC073592.4-201ENST00000623827 446 ntBASIC16.84■□□□□ 0.29
RFPL1O75677 AC148477.8-201ENST00000624298 468 ntBASIC16.84■□□□□ 0.29
RFPL1O75677 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFPL1O75677 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFPL1O75677 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.84■□□□□ 0.29
RFPL1O75677 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
RFPL1O75677 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFPL1O75677 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFPL1O75677 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.84■□□□□ 0.29
RFPL1O75677 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFPL1O75677 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFPL1O75677 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.84■□□□□ 0.29
RFPL1O75677 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFPL1O75677 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.84■□□□□ 0.29
RFPL1O75677 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.84■□□□□ 0.29
RFPL1O75677 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFPL1O75677 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
RFPL1O75677 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFPL1O75677 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFPL1O75677 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.84■□□□□ 0.29
RFPL1O75677 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
RFPL1O75677 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.83■□□□□ 0.29
RFPL1O75677 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.29
RFPL1O75677 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.83■□□□□ 0.29
RFPL1O75677 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.83■□□□□ 0.29
RFPL1O75677 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RFPL1O75677 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RFPL1O75677 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RFPL1O75677 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RFPL1O75677 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RFPL1O75677 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RFPL1O75677 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
RFPL1O75677 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.83■□□□□ 0.28
RFPL1O75677 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.83■□□□□ 0.28
RFPL1O75677 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.83■□□□□ 0.28
RFPL1O75677 MIR1233-2-201ENST00000408138 82 ntBASIC16.83■□□□□ 0.28
RFPL1O75677 MIR1233-1-201ENST00000408722 82 ntBASIC16.83■□□□□ 0.28
RFPL1O75677 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
RFPL1O75677 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RFPL1O75677 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.83■□□□□ 0.28
RFPL1O75677 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.83■□□□□ 0.28
RFPL1O75677 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RFPL1O75677 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.83■□□□□ 0.28
RFPL1O75677 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RFPL1O75677 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.83■□□□□ 0.28
RFPL1O75677 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.83■□□□□ 0.28
RFPL1O75677 TERC-201ENST00000602385 541 ntBASIC16.83■□□□□ 0.28
RFPL1O75677 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.83■□□□□ 0.28
RFPL1O75677 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RFPL1O75677 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RFPL1O75677 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
RFPL1O75677 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RFPL1O75677 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RFPL1O75677 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RFPL1O75677 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RFPL1O75677 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
RFPL1O75677 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RFPL1O75677 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.83■□□□□ 0.28
RFPL1O75677 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.82■□□□□ 0.28
RFPL1O75677 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFPL1O75677 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFPL1O75677 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RFPL1O75677 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFPL1O75677 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RFPL1O75677 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFPL1O75677 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.82■□□□□ 0.28
RFPL1O75677 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.82■□□□□ 0.28
RFPL1O75677 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFPL1O75677 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFPL1O75677 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.82■□□□□ 0.28
RFPL1O75677 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFPL1O75677 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFPL1O75677 AC243591.1-201ENST00000452967 1364 ntBASIC16.82■□□□□ 0.28
RFPL1O75677 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
RFPL1O75677 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RFPL1O75677 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFPL1O75677 AL590787.1-201ENST00000568856 1315 ntBASIC16.82■□□□□ 0.28
RFPL1O75677 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.82■□□□□ 0.28
RFPL1O75677 RBM17P3-201ENST00000417687 1192 ntBASIC16.82■□□□□ 0.28
RFPL1O75677 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RFPL1O75677 AC018712.1-201ENST00000455767 687 ntBASIC16.82■□□□□ 0.28
RFPL1O75677 SCARNA2-201ENST00000458748 420 ntBASIC16.82■□□□□ 0.28
RFPL1O75677 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.82■□□□□ 0.28
RFPL1O75677 AC106730.1-201ENST00000566722 1090 ntBASIC16.82■□□□□ 0.28
RFPL1O75677 AC139887.3-201ENST00000568585 713 ntBASIC16.82■□□□□ 0.28
RFPL1O75677 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.82■□□□□ 0.28
RFPL1O75677 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.82■□□□□ 0.28
RFPL1O75677 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms