Protein–RNA interactions for Protein: O75387

SLC43A1, Large neutral amino acids transporter small subunit 3, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC43A1O75387 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC43A1O75387 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC43A1O75387 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
SLC43A1O75387 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.25■□□□□ 0.03
SLC43A1O75387 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC43A1O75387 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SLC43A1O75387 KRT18P67-201ENST00000432816 1264 ntBASIC15.25■□□□□ 0.03
SLC43A1O75387 AC079781.3-201ENST00000449110 356 ntBASIC15.25■□□□□ 0.03
SLC43A1O75387 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC15.25■□□□□ 0.03
SLC43A1O75387 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.25■□□□□ 0.03
SLC43A1O75387 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.25■□□□□ 0.03
SLC43A1O75387 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.25■□□□□ 0.03
SLC43A1O75387 VPS51-217ENST00000639871 243 ntTSL 5 BASIC15.25■□□□□ 0.03
SLC43A1O75387 AC107918.4-202ENST00000641623 219 ntBASIC15.25■□□□□ 0.03
SLC43A1O75387 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
SLC43A1O75387 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
SLC43A1O75387 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
SLC43A1O75387 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.25■□□□□ 0.03
SLC43A1O75387 AC023824.1-201ENST00000562945 2975 ntBASIC15.25■□□□□ 0.03
SLC43A1O75387 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC43A1O75387 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC43A1O75387 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC43A1O75387 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.25■□□□□ 0.03
SLC43A1O75387 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
SLC43A1O75387 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.25■□□□□ 0.03
SLC43A1O75387 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC43A1O75387 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC43A1O75387 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC43A1O75387 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.25■□□□□ 0.03
SLC43A1O75387 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC43A1O75387 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.25■□□□□ 0.03
SLC43A1O75387 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC43A1O75387 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC43A1O75387 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC43A1O75387 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.24■□□□□ 0.03
SLC43A1O75387 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC43A1O75387 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.24■□□□□ 0.03
SLC43A1O75387 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC43A1O75387 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.24■□□□□ 0.03
SLC43A1O75387 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC43A1O75387 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC43A1O75387 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC43A1O75387 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC43A1O75387 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC43A1O75387 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC43A1O75387 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC43A1O75387 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
SLC43A1O75387 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC43A1O75387 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC43A1O75387 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC43A1O75387 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC43A1O75387 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC43A1O75387 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.24■□□□□ 0.03
SLC43A1O75387 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.24■□□□□ 0.03
SLC43A1O75387 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.24■□□□□ 0.03
SLC43A1O75387 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
SLC43A1O75387 RPS2P1-201ENST00000434010 821 ntBASIC15.24■□□□□ 0.03
SLC43A1O75387 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.24■□□□□ 0.03
SLC43A1O75387 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.24■□□□□ 0.03
SLC43A1O75387 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
SLC43A1O75387 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.24■□□□□ 0.03
SLC43A1O75387 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.24■□□□□ 0.03
SLC43A1O75387 AL160237.2-201ENST00000556165 472 ntBASIC15.24■□□□□ 0.03
SLC43A1O75387 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.24■□□□□ 0.03
SLC43A1O75387 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SLC43A1O75387 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.24■□□□□ 0.03
SLC43A1O75387 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC15.24■□□□□ 0.03
SLC43A1O75387 AC004706.3-202ENST00000621574 984 ntBASIC15.24■□□□□ 0.03
SLC43A1O75387 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.24■□□□□ 0.03
SLC43A1O75387 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC43A1O75387 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC43A1O75387 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC43A1O75387 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC43A1O75387 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC43A1O75387 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC43A1O75387 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
SLC43A1O75387 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC43A1O75387 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC43A1O75387 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC43A1O75387 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.24■□□□□ 0.03
SLC43A1O75387 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
SLC43A1O75387 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
SLC43A1O75387 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC43A1O75387 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
SLC43A1O75387 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.23■□□□□ 0.03
SLC43A1O75387 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
SLC43A1O75387 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
SLC43A1O75387 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.23■□□□□ 0.03
SLC43A1O75387 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC43A1O75387 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
SLC43A1O75387 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
SLC43A1O75387 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
SLC43A1O75387 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.23■□□□□ 0.03
SLC43A1O75387 TSPY26P-202ENST00000565928 3884 ntBASIC15.23■□□□□ 0.03
SLC43A1O75387 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
SLC43A1O75387 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SLC43A1O75387 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SLC43A1O75387 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.23■□□□□ 0.03
SLC43A1O75387 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.23■□□□□ 0.03
SLC43A1O75387 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms