Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TSPAN3O60637 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TSPAN3O60637 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TSPAN3O60637 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC17.24■□□□□ 0.35
TSPAN3O60637 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.24■□□□□ 0.35
TSPAN3O60637 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TSPAN3O60637 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.24■□□□□ 0.35
TSPAN3O60637 AC079140.1-201ENST00000508039 487 ntBASIC17.24■□□□□ 0.35
TSPAN3O60637 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.24■□□□□ 0.35
TSPAN3O60637 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.24■□□□□ 0.35
TSPAN3O60637 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.24■□□□□ 0.35
TSPAN3O60637 AC243562.1-201ENST00000560672 389 ntBASIC17.24■□□□□ 0.35
TSPAN3O60637 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.24■□□□□ 0.35
TSPAN3O60637 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
TSPAN3O60637 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.24■□□□□ 0.35
TSPAN3O60637 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TSPAN3O60637 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.24■□□□□ 0.35
TSPAN3O60637 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TSPAN3O60637 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TSPAN3O60637 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
TSPAN3O60637 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
TSPAN3O60637 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TSPAN3O60637 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.24■□□□□ 0.35
TSPAN3O60637 AC006277.1-201ENST00000624348 1610 ntBASIC17.24■□□□□ 0.35
TSPAN3O60637 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.24■□□□□ 0.35
TSPAN3O60637 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TSPAN3O60637 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TSPAN3O60637 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TSPAN3O60637 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
TSPAN3O60637 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TSPAN3O60637 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TSPAN3O60637 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TSPAN3O60637 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.23■□□□□ 0.35
TSPAN3O60637 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TSPAN3O60637 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TSPAN3O60637 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TSPAN3O60637 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.23■□□□□ 0.35
TSPAN3O60637 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TSPAN3O60637 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.23■□□□□ 0.35
TSPAN3O60637 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TSPAN3O60637 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TSPAN3O60637 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TSPAN3O60637 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.23■□□□□ 0.35
TSPAN3O60637 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TSPAN3O60637 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TSPAN3O60637 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TSPAN3O60637 AC005237.2-201ENST00000434368 219 ntBASIC17.23■□□□□ 0.35
TSPAN3O60637 AL592309.1-201ENST00000443127 649 ntBASIC17.23■□□□□ 0.35
TSPAN3O60637 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TSPAN3O60637 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.23■□□□□ 0.35
TSPAN3O60637 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TSPAN3O60637 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.23■□□□□ 0.35
TSPAN3O60637 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.23■□□□□ 0.35
TSPAN3O60637 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TSPAN3O60637 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.23■□□□□ 0.35
TSPAN3O60637 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TSPAN3O60637 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.23■□□□□ 0.35
TSPAN3O60637 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TSPAN3O60637 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TSPAN3O60637 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.23■□□□□ 0.35
TSPAN3O60637 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
TSPAN3O60637 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.23■□□□□ 0.35
TSPAN3O60637 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.23■□□□□ 0.35
TSPAN3O60637 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TSPAN3O60637 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.22■□□□□ 0.35
TSPAN3O60637 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TSPAN3O60637 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TSPAN3O60637 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TSPAN3O60637 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TSPAN3O60637 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TSPAN3O60637 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TSPAN3O60637 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TSPAN3O60637 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TSPAN3O60637 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TSPAN3O60637 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TSPAN3O60637 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.22■□□□□ 0.35
TSPAN3O60637 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TSPAN3O60637 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
TSPAN3O60637 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TSPAN3O60637 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TSPAN3O60637 AC005915.1-201ENST00000624912 2018 ntBASIC17.22■□□□□ 0.35
TSPAN3O60637 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TSPAN3O60637 PMS2P4-201ENST00000412466 1052 ntBASIC17.22■□□□□ 0.35
TSPAN3O60637 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.22■□□□□ 0.35
TSPAN3O60637 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
TSPAN3O60637 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.22■□□□□ 0.35
TSPAN3O60637 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TSPAN3O60637 AC109635.5-201ENST00000533593 962 ntBASIC17.22■□□□□ 0.35
TSPAN3O60637 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.22■□□□□ 0.35
TSPAN3O60637 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.22■□□□□ 0.35
TSPAN3O60637 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.22■□□□□ 0.35
TSPAN3O60637 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
TSPAN3O60637 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
TSPAN3O60637 AC016027.1-202ENST00000607927 1699 ntBASIC17.22■□□□□ 0.35
TSPAN3O60637 AL391256.1-201ENST00000443260 1855 ntBASIC17.22■□□□□ 0.35
TSPAN3O60637 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TSPAN3O60637 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
TSPAN3O60637 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TSPAN3O60637 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TSPAN3O60637 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms