Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC28A2O43868 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SLC28A2O43868 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SLC28A2O43868 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SLC28A2O43868 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC28A2O43868 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC28A2O43868 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
SLC28A2O43868 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SLC28A2O43868 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC28A2O43868 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC28A2O43868 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC28A2O43868 AC005915.1-201ENST00000624912 2018 ntBASIC16.18■□□□□ 0.18
SLC28A2O43868 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC28A2O43868 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC28A2O43868 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.18■□□□□ 0.18
SLC28A2O43868 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
SLC28A2O43868 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC28A2O43868 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC28A2O43868 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.18■□□□□ 0.18
SLC28A2O43868 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.18■□□□□ 0.18
SLC28A2O43868 MRPL20P1-201ENST00000400819 433 ntBASIC16.18■□□□□ 0.18
SLC28A2O43868 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.18■□□□□ 0.18
SLC28A2O43868 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SLC28A2O43868 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC28A2O43868 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC16.18■□□□□ 0.18
SLC28A2O43868 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.18■□□□□ 0.18
SLC28A2O43868 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.18■□□□□ 0.18
SLC28A2O43868 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.18■□□□□ 0.18
SLC28A2O43868 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.18■□□□□ 0.18
SLC28A2O43868 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.18■□□□□ 0.18
SLC28A2O43868 STK25P1-201ENST00000585406 838 ntBASIC16.18■□□□□ 0.18
SLC28A2O43868 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC28A2O43868 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.18■□□□□ 0.18
SLC28A2O43868 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC28A2O43868 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.18■□□□□ 0.18
SLC28A2O43868 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC28A2O43868 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC28A2O43868 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.18■□□□□ 0.18
SLC28A2O43868 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.18■□□□□ 0.18
SLC28A2O43868 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SLC28A2O43868 AC092053.1-201ENST00000605787 1936 ntBASIC16.17■□□□□ 0.18
SLC28A2O43868 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC28A2O43868 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
SLC28A2O43868 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
SLC28A2O43868 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SLC28A2O43868 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SLC28A2O43868 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.17■□□□□ 0.18
SLC28A2O43868 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
SLC28A2O43868 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
SLC28A2O43868 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC28A2O43868 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
SLC28A2O43868 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC28A2O43868 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SLC28A2O43868 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SLC28A2O43868 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC28A2O43868 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
SLC28A2O43868 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC28A2O43868 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC28A2O43868 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC28A2O43868 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.17■□□□□ 0.18
SLC28A2O43868 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC28A2O43868 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SLC28A2O43868 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SLC28A2O43868 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.17■□□□□ 0.18
SLC28A2O43868 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.17■□□□□ 0.18
SLC28A2O43868 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.17■□□□□ 0.18
SLC28A2O43868 VN2R19P-201ENST00000442399 1052 ntBASIC16.17■□□□□ 0.18
SLC28A2O43868 AC093214.1-201ENST00000511688 1107 ntBASIC16.17■□□□□ 0.18
SLC28A2O43868 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.17■□□□□ 0.18
SLC28A2O43868 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.17■□□□□ 0.18
SLC28A2O43868 AC087641.1-201ENST00000557561 1021 ntBASIC16.17■□□□□ 0.18
SLC28A2O43868 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.17■□□□□ 0.18
SLC28A2O43868 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.17■□□□□ 0.18
SLC28A2O43868 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
SLC28A2O43868 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.17■□□□□ 0.18
SLC28A2O43868 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.17■□□□□ 0.18
SLC28A2O43868 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.17■□□□□ 0.18
SLC28A2O43868 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
SLC28A2O43868 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.17■□□□□ 0.18
SLC28A2O43868 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC28A2O43868 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SLC28A2O43868 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC28A2O43868 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SLC28A2O43868 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC16.17■□□□□ 0.18
SLC28A2O43868 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SLC28A2O43868 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC28A2O43868 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC28A2O43868 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.17■□□□□ 0.18
SLC28A2O43868 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.17■□□□□ 0.18
SLC28A2O43868 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC28A2O43868 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
SLC28A2O43868 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SLC28A2O43868 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SLC28A2O43868 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
SLC28A2O43868 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC28A2O43868 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC28A2O43868 TNRC18P3-201ENST00000441896 2691 ntBASIC16.16■□□□□ 0.18
SLC28A2O43868 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.16■□□□□ 0.18
SLC28A2O43868 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC28A2O43868 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms