Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
CHD1O14646 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CHD1O14646 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
CHD1O14646 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CHD1O14646 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CHD1O14646 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CHD1O14646 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
CHD1O14646 BAATP1-201ENST00000412284 1225 ntBASIC26.49■■□□□ 1.83
CHD1O14646 TSACC-208ENST00000481479 741 ntTSL 2 BASIC26.49■■□□□ 1.83
CHD1O14646 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC26.49■■□□□ 1.83
CHD1O14646 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC26.49■■□□□ 1.83
CHD1O14646 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC26.49■■□□□ 1.83
CHD1O14646 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
CHD1O14646 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC26.49■■□□□ 1.83
CHD1O14646 AC013467.2-201ENST00000605472 835 ntBASIC26.49■■□□□ 1.83
CHD1O14646 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC26.49■■□□□ 1.83
CHD1O14646 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC26.49■■□□□ 1.83
CHD1O14646 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CHD1O14646 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
CHD1O14646 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
CHD1O14646 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CHD1O14646 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
CHD1O14646 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC26.49■■□□□ 1.83
CHD1O14646 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC26.49■■□□□ 1.83
CHD1O14646 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
CHD1O14646 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
CHD1O14646 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CHD1O14646 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
CHD1O14646 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
CHD1O14646 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
CHD1O14646 IGF1-203ENST00000392904 761 ntTSL 5 BASIC26.48■■□□□ 1.83
CHD1O14646 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC26.48■■□□□ 1.83
CHD1O14646 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
CHD1O14646 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
CHD1O14646 AC005252.2-201ENST00000624630 1141 ntBASIC26.48■■□□□ 1.83
CHD1O14646 AL607033.1-201ENST00000623900 1599 ntBASIC26.48■■□□□ 1.83
CHD1O14646 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
CHD1O14646 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CHD1O14646 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC26.48■■□□□ 1.83
CHD1O14646 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CHD1O14646 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC26.48■■□□□ 1.83
CHD1O14646 AC092978.1-202ENST00000637590 1327 ntBASIC26.48■■□□□ 1.83
CHD1O14646 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC26.48■■□□□ 1.83
CHD1O14646 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
CHD1O14646 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CHD1O14646 AC116353.5-201ENST00000638148 1699 ntBASIC26.48■■□□□ 1.83
CHD1O14646 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC26.48■■□□□ 1.83
CHD1O14646 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
CHD1O14646 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
CHD1O14646 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC26.48■■□□□ 1.83
CHD1O14646 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC26.48■■□□□ 1.83
CHD1O14646 CNN2P8-201ENST00000421872 913 ntBASIC26.48■■□□□ 1.83
CHD1O14646 FAM86LP-201ENST00000478302 853 ntBASIC26.48■■□□□ 1.83
CHD1O14646 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC26.48■■□□□ 1.83
CHD1O14646 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC26.48■■□□□ 1.83
CHD1O14646 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC26.48■■□□□ 1.83
CHD1O14646 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC26.48■■□□□ 1.83
CHD1O14646 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CHD1O14646 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC26.47■■□□□ 1.83
CHD1O14646 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
CHD1O14646 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
CHD1O14646 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC26.47■■□□□ 1.83
CHD1O14646 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
CHD1O14646 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
CHD1O14646 AL355312.1-201ENST00000407115 2176 ntBASIC26.47■■□□□ 1.83
CHD1O14646 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC26.47■■□□□ 1.83
CHD1O14646 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
CHD1O14646 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
CHD1O14646 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
CHD1O14646 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC26.47■■□□□ 1.83
CHD1O14646 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC26.47■■□□□ 1.83
CHD1O14646 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
CHD1O14646 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC26.47■■□□□ 1.83
CHD1O14646 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC26.47■■□□□ 1.83
CHD1O14646 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
CHD1O14646 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC26.47■■□□□ 1.83
CHD1O14646 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC26.47■■□□□ 1.83
CHD1O14646 AL136982.4-201ENST00000437689 1740 ntBASIC26.46■■□□□ 1.83
CHD1O14646 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC26.46■■□□□ 1.83
CHD1O14646 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CHD1O14646 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC26.46■■□□□ 1.83
CHD1O14646 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CHD1O14646 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CHD1O14646 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC26.46■■□□□ 1.83
CHD1O14646 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC26.46■■□□□ 1.83
CHD1O14646 AC005077.2-201ENST00000449786 690 ntBASIC26.46■■□□□ 1.83
CHD1O14646 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC26.46■■□□□ 1.83
CHD1O14646 Z93015.1-201ENST00000451718 390 ntBASIC26.46■■□□□ 1.83
CHD1O14646 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC26.46■■□□□ 1.83
CHD1O14646 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC26.46■■□□□ 1.83
CHD1O14646 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC26.46■■□□□ 1.83
CHD1O14646 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
CHD1O14646 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC26.46■■□□□ 1.83
CHD1O14646 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC26.46■■□□□ 1.83
CHD1O14646 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC26.46■■□□□ 1.83
CHD1O14646 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CHD1O14646 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC26.46■■□□□ 1.83
CHD1O14646 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CHD1O14646 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CHD1O14646 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms