Protein–RNA interactions for Protein: O00629

KPNA4, Importin subunit alpha-3, humanhuman

Predicted RBP Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4O00629 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
KPNA4O00629 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
KPNA4O00629 PPIH-202ENST00000372549 327 ntTSL 3 BASIC15.75■□□□□ 0.11
KPNA4O00629 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.75■□□□□ 0.11
KPNA4O00629 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.75■□□□□ 0.11
KPNA4O00629 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.75■□□□□ 0.11
KPNA4O00629 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC15.75■□□□□ 0.11
KPNA4O00629 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
KPNA4O00629 KLF4P1-201ENST00000412782 1185 ntBASIC15.75■□□□□ 0.11
KPNA4O00629 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC15.75■□□□□ 0.11
KPNA4O00629 CIB2-208ENST00000560618 804 ntTSL 2 BASIC15.75■□□□□ 0.11
KPNA4O00629 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC15.75■□□□□ 0.11
KPNA4O00629 Z69720.1-201ENST00000601483 472 ntBASIC15.75■□□□□ 0.11
KPNA4O00629 AC116407.4-201ENST00000623319 1061 ntBASIC15.75■□□□□ 0.11
KPNA4O00629 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC15.75■□□□□ 0.11
KPNA4O00629 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
KPNA4O00629 AL353593.2-201ENST00000602529 1483 ntBASIC15.75■□□□□ 0.11
KPNA4O00629 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.75■□□□□ 0.11
KPNA4O00629 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
KPNA4O00629 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
KPNA4O00629 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.75■□□□□ 0.11
KPNA4O00629 AL135999.2-201ENST00000622438 1686 ntBASIC15.75■□□□□ 0.11
KPNA4O00629 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.75■□□□□ 0.11
KPNA4O00629 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
KPNA4O00629 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
KPNA4O00629 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
KPNA4O00629 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.75■□□□□ 0.11
KPNA4O00629 AC126177.1-201ENST00000547829 2218 ntBASIC15.75■□□□□ 0.11
KPNA4O00629 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.75■□□□□ 0.11
KPNA4O00629 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.75■□□□□ 0.11
KPNA4O00629 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
KPNA4O00629 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
KPNA4O00629 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
KPNA4O00629 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
KPNA4O00629 AC009336.1-201ENST00000608941 1553 ntBASIC15.75■□□□□ 0.11
KPNA4O00629 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
KPNA4O00629 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
KPNA4O00629 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
KPNA4O00629 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.74■□□□□ 0.11
KPNA4O00629 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
KPNA4O00629 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
KPNA4O00629 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.74■□□□□ 0.11
KPNA4O00629 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
KPNA4O00629 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
KPNA4O00629 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.74■□□□□ 0.11
KPNA4O00629 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
KPNA4O00629 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
KPNA4O00629 BET1L-202ENST00000332865 533 ntTSL 5 BASIC15.74■□□□□ 0.11
KPNA4O00629 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
KPNA4O00629 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.74■□□□□ 0.11
KPNA4O00629 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
KPNA4O00629 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.74■□□□□ 0.11
KPNA4O00629 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC15.74■□□□□ 0.11
KPNA4O00629 TPSP2-201ENST00000561760 610 ntBASIC15.74■□□□□ 0.11
KPNA4O00629 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
KPNA4O00629 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
KPNA4O00629 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
KPNA4O00629 AL590326.2-201ENST00000625139 305 ntBASIC15.74■□□□□ 0.11
KPNA4O00629 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
KPNA4O00629 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
KPNA4O00629 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
KPNA4O00629 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
KPNA4O00629 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
KPNA4O00629 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
KPNA4O00629 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
KPNA4O00629 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
KPNA4O00629 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
KPNA4O00629 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
KPNA4O00629 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
KPNA4O00629 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
KPNA4O00629 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.74■□□□□ 0.11
KPNA4O00629 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.74■□□□□ 0.11
KPNA4O00629 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
KPNA4O00629 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
KPNA4O00629 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC15.73■□□□□ 0.11
KPNA4O00629 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
KPNA4O00629 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
KPNA4O00629 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
KPNA4O00629 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.73■□□□□ 0.11
KPNA4O00629 AC132938.5-201ENST00000624980 1813 ntBASIC15.73■□□□□ 0.11
KPNA4O00629 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
KPNA4O00629 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
KPNA4O00629 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
KPNA4O00629 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
KPNA4O00629 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
KPNA4O00629 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
KPNA4O00629 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
KPNA4O00629 RNF216P1-203ENST00000404404 2427 ntBASIC15.73■□□□□ 0.11
KPNA4O00629 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.73■□□□□ 0.11
KPNA4O00629 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
KPNA4O00629 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
KPNA4O00629 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
KPNA4O00629 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
KPNA4O00629 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
KPNA4O00629 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
KPNA4O00629 ISCU-203ENST00000431221 799 ntTSL 2 BASIC15.73■□□□□ 0.11
KPNA4O00629 AP002383.4-201ENST00000442518 975 ntBASIC15.73■□□□□ 0.11
KPNA4O00629 DANCR-204ENST00000444958 709 ntTSL 3 BASIC15.73■□□□□ 0.11
KPNA4O00629 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
KPNA4O00629 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms