Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00473A8K010 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00473A8K010 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00473A8K010 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00473A8K010 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00473A8K010 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00473A8K010 AL031731.1-201ENST00000642131 2094 ntBASIC13.65□□□□□ -0.22
LINC00473A8K010 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
LINC00473A8K010 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00473A8K010 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC13.65□□□□□ -0.22
LINC00473A8K010 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00473A8K010 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
LINC00473A8K010 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC13.65□□□□□ -0.22
LINC00473A8K010 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00473A8K010 AL162727.3-201ENST00000635661 2787 ntBASIC13.65□□□□□ -0.22
LINC00473A8K010 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00473A8K010 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00473A8K010 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC13.65□□□□□ -0.22
LINC00473A8K010 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00473A8K010 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
LINC00473A8K010 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC13.65□□□□□ -0.22
LINC00473A8K010 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
LINC00473A8K010 AC091304.2-201ENST00000564639 760 ntBASIC13.65□□□□□ -0.22
LINC00473A8K010 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC13.65□□□□□ -0.22
LINC00473A8K010 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00473A8K010 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC13.65□□□□□ -0.22
LINC00473A8K010 AC025062.2-201ENST00000605477 670 ntBASIC13.65□□□□□ -0.22
LINC00473A8K010 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
LINC00473A8K010 AF228730.7-201ENST00000641842 219 ntBASIC13.65□□□□□ -0.22
LINC00473A8K010 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC13.65□□□□□ -0.22
LINC00473A8K010 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00473A8K010 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00473A8K010 PC-214ENST00000628663 1470 ntTSL 5 BASIC13.65□□□□□ -0.22
LINC00473A8K010 AC006504.4-201ENST00000592118 1568 ntBASIC13.65□□□□□ -0.22
LINC00473A8K010 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00473A8K010 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00473A8K010 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC13.65□□□□□ -0.22
LINC00473A8K010 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00473A8K010 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00473A8K010 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00473A8K010 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00473A8K010 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC13.65□□□□□ -0.22
LINC00473A8K010 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00473A8K010 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC13.65□□□□□ -0.22
LINC00473A8K010 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
LINC00473A8K010 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
LINC00473A8K010 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
LINC00473A8K010 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00473A8K010 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
LINC00473A8K010 GGT4P-201ENST00000623672 1708 ntBASIC13.64□□□□□ -0.23
LINC00473A8K010 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00473A8K010 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00473A8K010 AC022188.1-201ENST00000620960 1664 ntBASIC13.64□□□□□ -0.23
LINC00473A8K010 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00473A8K010 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00473A8K010 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC13.64□□□□□ -0.23
LINC00473A8K010 AKR1C7P-201ENST00000305623 895 ntBASIC13.64□□□□□ -0.23
LINC00473A8K010 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00473A8K010 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC13.64□□□□□ -0.23
LINC00473A8K010 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00473A8K010 ELK2BP-201ENST00000415014 1224 ntBASIC13.64□□□□□ -0.23
LINC00473A8K010 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC13.64□□□□□ -0.23
LINC00473A8K010 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC13.64□□□□□ -0.23
LINC00473A8K010 SCARNA2-201ENST00000458748 420 ntBASIC13.64□□□□□ -0.23
LINC00473A8K010 SLC25A6P2-201ENST00000497974 877 ntBASIC13.64□□□□□ -0.23
LINC00473A8K010 SKP2-204ENST00000508514 821 ntTSL 3 BASIC13.64□□□□□ -0.23
LINC00473A8K010 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC13.64□□□□□ -0.23
LINC00473A8K010 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC13.64□□□□□ -0.23
LINC00473A8K010 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC13.64□□□□□ -0.23
LINC00473A8K010 PAM16-208ENST00000573553 722 ntTSL 2 BASIC13.64□□□□□ -0.23
LINC00473A8K010 PRR29-207ENST00000580752 458 ntTSL 3 BASIC13.64□□□□□ -0.23
LINC00473A8K010 CYGB-205ENST00000590175 830 ntTSL 3 BASIC13.64□□□□□ -0.23
LINC00473A8K010 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC13.64□□□□□ -0.23
LINC00473A8K010 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
LINC00473A8K010 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC13.64□□□□□ -0.23
LINC00473A8K010 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
LINC00473A8K010 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC13.64□□□□□ -0.23
LINC00473A8K010 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
LINC00473A8K010 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00473A8K010 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
LINC00473A8K010 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00473A8K010 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00473A8K010 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC13.64□□□□□ -0.23
LINC00473A8K010 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00473A8K010 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00473A8K010 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
LINC00473A8K010 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC13.64□□□□□ -0.23
LINC00473A8K010 AC131009.4-201ENST00000624048 1740 ntBASIC13.64□□□□□ -0.23
LINC00473A8K010 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00473A8K010 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC13.64□□□□□ -0.23
LINC00473A8K010 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00473A8K010 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00473A8K010 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00473A8K010 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00473A8K010 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00473A8K010 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00473A8K010 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00473A8K010 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00473A8K010 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00473A8K010 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms