Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC19.17■□□□□ 0.66
TMEM88BA6NKF7 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC19.17■□□□□ 0.66
TMEM88BA6NKF7 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TMEM88BA6NKF7 RERG-205ENST00000537647 935 ntTSL 2 BASIC19.17■□□□□ 0.66
TMEM88BA6NKF7 ACTG1P17-201ENST00000558391 1119 ntBASIC19.17■□□□□ 0.66
TMEM88BA6NKF7 AC025048.3-201ENST00000590609 569 ntBASIC19.17■□□□□ 0.66
TMEM88BA6NKF7 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC19.17■□□□□ 0.66
TMEM88BA6NKF7 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
TMEM88BA6NKF7 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC19.17■□□□□ 0.66
TMEM88BA6NKF7 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
TMEM88BA6NKF7 AC005702.4-201ENST00000618393 416 ntBASIC19.17■□□□□ 0.66
TMEM88BA6NKF7 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TMEM88BA6NKF7 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TMEM88BA6NKF7 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
TMEM88BA6NKF7 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TMEM88BA6NKF7 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TMEM88BA6NKF7 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TMEM88BA6NKF7 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
TMEM88BA6NKF7 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TMEM88BA6NKF7 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
TMEM88BA6NKF7 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TMEM88BA6NKF7 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TMEM88BA6NKF7 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TMEM88BA6NKF7 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TMEM88BA6NKF7 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.16■□□□□ 0.66
TMEM88BA6NKF7 AC120498.9-201ENST00000339021 3867 ntBASIC19.16■□□□□ 0.66
TMEM88BA6NKF7 MIR326-201ENST00000362220 95 ntBASIC19.16■□□□□ 0.66
TMEM88BA6NKF7 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TMEM88BA6NKF7 AC026954.1-201ENST00000429771 1293 ntBASIC19.16■□□□□ 0.66
TMEM88BA6NKF7 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC19.16■□□□□ 0.66
TMEM88BA6NKF7 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TMEM88BA6NKF7 AKR7A2P1-201ENST00000460134 915 ntBASIC19.16■□□□□ 0.66
TMEM88BA6NKF7 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
TMEM88BA6NKF7 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC19.16■□□□□ 0.66
TMEM88BA6NKF7 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC19.16■□□□□ 0.66
TMEM88BA6NKF7 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC19.16■□□□□ 0.66
TMEM88BA6NKF7 AC061975.2-201ENST00000581722 295 ntBASIC19.16■□□□□ 0.66
TMEM88BA6NKF7 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
TMEM88BA6NKF7 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
TMEM88BA6NKF7 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC19.16■□□□□ 0.66
TMEM88BA6NKF7 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TMEM88BA6NKF7 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC19.16■□□□□ 0.66
TMEM88BA6NKF7 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TMEM88BA6NKF7 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TMEM88BA6NKF7 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TMEM88BA6NKF7 LINC00304-203ENST00000565008 1864 ntBASIC19.16■□□□□ 0.66
TMEM88BA6NKF7 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
TMEM88BA6NKF7 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TMEM88BA6NKF7 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
TMEM88BA6NKF7 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TMEM88BA6NKF7 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
TMEM88BA6NKF7 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
TMEM88BA6NKF7 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.15■□□□□ 0.66
TMEM88BA6NKF7 WIZP1-201ENST00000531444 2299 ntBASIC19.15■□□□□ 0.66
TMEM88BA6NKF7 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TMEM88BA6NKF7 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TMEM88BA6NKF7 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TMEM88BA6NKF7 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TMEM88BA6NKF7 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
TMEM88BA6NKF7 AL662890.1-201ENST00000396818 632 ntBASIC19.15■□□□□ 0.66
TMEM88BA6NKF7 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC19.15■□□□□ 0.66
TMEM88BA6NKF7 UPF3AP2-201ENST00000457924 1132 ntBASIC19.15■□□□□ 0.66
TMEM88BA6NKF7 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC19.15■□□□□ 0.66
TMEM88BA6NKF7 FTH1P14-201ENST00000482930 551 ntBASIC19.15■□□□□ 0.66
TMEM88BA6NKF7 FAM86HP-204ENST00000513466 959 ntBASIC19.15■□□□□ 0.66
TMEM88BA6NKF7 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC19.15■□□□□ 0.66
TMEM88BA6NKF7 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC19.15■□□□□ 0.66
TMEM88BA6NKF7 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC19.15■□□□□ 0.66
TMEM88BA6NKF7 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC19.15■□□□□ 0.66
TMEM88BA6NKF7 AC036164.1-201ENST00000570544 333 ntBASIC19.15■□□□□ 0.66
TMEM88BA6NKF7 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC19.15■□□□□ 0.66
TMEM88BA6NKF7 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
TMEM88BA6NKF7 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC19.15■□□□□ 0.66
TMEM88BA6NKF7 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC19.15■□□□□ 0.66
TMEM88BA6NKF7 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TMEM88BA6NKF7 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC19.15■□□□□ 0.66
TMEM88BA6NKF7 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
TMEM88BA6NKF7 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC19.15■□□□□ 0.66
TMEM88BA6NKF7 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC19.15■□□□□ 0.66
TMEM88BA6NKF7 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
TMEM88BA6NKF7 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TMEM88BA6NKF7 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
TMEM88BA6NKF7 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TMEM88BA6NKF7 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TMEM88BA6NKF7 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
TMEM88BA6NKF7 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TMEM88BA6NKF7 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TMEM88BA6NKF7 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
TMEM88BA6NKF7 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
TMEM88BA6NKF7 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TMEM88BA6NKF7 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TMEM88BA6NKF7 BTBD6P1-201ENST00000412176 1267 ntBASIC19.14■□□□□ 0.65
TMEM88BA6NKF7 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC19.14■□□□□ 0.65
TMEM88BA6NKF7 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC19.14■□□□□ 0.65
TMEM88BA6NKF7 AC104306.2-201ENST00000451877 341 ntBASIC19.14■□□□□ 0.65
TMEM88BA6NKF7 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC19.14■□□□□ 0.65
TMEM88BA6NKF7 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC19.14■□□□□ 0.65
TMEM88BA6NKF7 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC19.14■□□□□ 0.65
TMEM88BA6NKF7 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TMEM88BA6NKF7 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms