Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TCRBV9S1A1TA0A576 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
TCRBV9S1A1TA0A576 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TCRBV9S1A1TA0A576 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TCRBV9S1A1TA0A576 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.88■□□□□ 0.29
TCRBV9S1A1TA0A576 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TCRBV9S1A1TA0A576 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.88■□□□□ 0.29
TCRBV9S1A1TA0A576 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TCRBV9S1A1TA0A576 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.88■□□□□ 0.29
TCRBV9S1A1TA0A576 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TCRBV9S1A1TA0A576 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TCRBV9S1A1TA0A576 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.88■□□□□ 0.29
TCRBV9S1A1TA0A576 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
TCRBV9S1A1TA0A576 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.88■□□□□ 0.29
TCRBV9S1A1TA0A576 AL589182.2-201ENST00000619332 1049 ntBASIC16.88■□□□□ 0.29
TCRBV9S1A1TA0A576 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TCRBV9S1A1TA0A576 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.88■□□□□ 0.29
TCRBV9S1A1TA0A576 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.88■□□□□ 0.29
TCRBV9S1A1TA0A576 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TCRBV9S1A1TA0A576 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TCRBV9S1A1TA0A576 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TCRBV9S1A1TA0A576 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TCRBV9S1A1TA0A576 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TCRBV9S1A1TA0A576 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TCRBV9S1A1TA0A576 KRT8P39-201ENST00000396270 1433 ntBASIC16.87■□□□□ 0.29
TCRBV9S1A1TA0A576 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TCRBV9S1A1TA0A576 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TCRBV9S1A1TA0A576 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.87■□□□□ 0.29
TCRBV9S1A1TA0A576 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TCRBV9S1A1TA0A576 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TCRBV9S1A1TA0A576 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TCRBV9S1A1TA0A576 LINC00554-201ENST00000564841 3011 ntBASIC16.87■□□□□ 0.29
TCRBV9S1A1TA0A576 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TCRBV9S1A1TA0A576 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TCRBV9S1A1TA0A576 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
TCRBV9S1A1TA0A576 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TCRBV9S1A1TA0A576 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TCRBV9S1A1TA0A576 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TCRBV9S1A1TA0A576 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
TCRBV9S1A1TA0A576 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.87■□□□□ 0.29
TCRBV9S1A1TA0A576 FAM210CP-201ENST00000445714 574 ntBASIC16.87■□□□□ 0.29
TCRBV9S1A1TA0A576 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TCRBV9S1A1TA0A576 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.87■□□□□ 0.29
TCRBV9S1A1TA0A576 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TCRBV9S1A1TA0A576 REXO1L3P-201ENST00000622202 1288 ntBASIC16.87■□□□□ 0.29
TCRBV9S1A1TA0A576 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.87■□□□□ 0.29
TCRBV9S1A1TA0A576 AC006449.6-201ENST00000612330 2296 ntBASIC16.87■□□□□ 0.29
TCRBV9S1A1TA0A576 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TCRBV9S1A1TA0A576 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TCRBV9S1A1TA0A576 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.87■□□□□ 0.29
TCRBV9S1A1TA0A576 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TCRBV9S1A1TA0A576 AC002310.6-201ENST00000624451 1377 ntBASIC16.87■□□□□ 0.29
TCRBV9S1A1TA0A576 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.87■□□□□ 0.29
TCRBV9S1A1TA0A576 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TCRBV9S1A1TA0A576 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TCRBV9S1A1TA0A576 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.87■□□□□ 0.29
TCRBV9S1A1TA0A576 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TCRBV9S1A1TA0A576 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TCRBV9S1A1TA0A576 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TCRBV9S1A1TA0A576 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.86■□□□□ 0.29
TCRBV9S1A1TA0A576 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TCRBV9S1A1TA0A576 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TCRBV9S1A1TA0A576 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
TCRBV9S1A1TA0A576 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.86■□□□□ 0.29
TCRBV9S1A1TA0A576 AL356309.3-201ENST00000624132 1934 ntBASIC16.86■□□□□ 0.29
TCRBV9S1A1TA0A576 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
TCRBV9S1A1TA0A576 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
TCRBV9S1A1TA0A576 AC010491.1-201ENST00000563101 2797 ntBASIC16.86■□□□□ 0.29
TCRBV9S1A1TA0A576 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TCRBV9S1A1TA0A576 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TCRBV9S1A1TA0A576 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
TCRBV9S1A1TA0A576 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.86■□□□□ 0.29
TCRBV9S1A1TA0A576 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TCRBV9S1A1TA0A576 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TCRBV9S1A1TA0A576 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TCRBV9S1A1TA0A576 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.86■□□□□ 0.29
TCRBV9S1A1TA0A576 RBM17P3-201ENST00000417687 1192 ntBASIC16.86■□□□□ 0.29
TCRBV9S1A1TA0A576 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TCRBV9S1A1TA0A576 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TCRBV9S1A1TA0A576 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.86■□□□□ 0.29
TCRBV9S1A1TA0A576 AC087163.2-201ENST00000457299 853 ntBASIC16.86■□□□□ 0.29
TCRBV9S1A1TA0A576 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TCRBV9S1A1TA0A576 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.86■□□□□ 0.29
TCRBV9S1A1TA0A576 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
TCRBV9S1A1TA0A576 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
TCRBV9S1A1TA0A576 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.86■□□□□ 0.29
TCRBV9S1A1TA0A576 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.86■□□□□ 0.29
TCRBV9S1A1TA0A576 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.86■□□□□ 0.29
TCRBV9S1A1TA0A576 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.86■□□□□ 0.29
TCRBV9S1A1TA0A576 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.86■□□□□ 0.29
TCRBV9S1A1TA0A576 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.86■□□□□ 0.29
TCRBV9S1A1TA0A576 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TCRBV9S1A1TA0A576 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.86■□□□□ 0.29
TCRBV9S1A1TA0A576 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TCRBV9S1A1TA0A576 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TCRBV9S1A1TA0A576 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TCRBV9S1A1TA0A576 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TCRBV9S1A1TA0A576 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
TCRBV9S1A1TA0A576 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TCRBV9S1A1TA0A576 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms