Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC12.21□□□□□ -0.46
TRGV1A0A0A0MS02 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
TRGV1A0A0A0MS02 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC12.21□□□□□ -0.46
TRGV1A0A0A0MS02 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
TRGV1A0A0A0MS02 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
TRGV1A0A0A0MS02 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC12.21□□□□□ -0.46
TRGV1A0A0A0MS02 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC12.21□□□□□ -0.46
TRGV1A0A0A0MS02 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
TRGV1A0A0A0MS02 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
TRGV1A0A0A0MS02 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC12.21□□□□□ -0.46
TRGV1A0A0A0MS02 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
TRGV1A0A0A0MS02 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV1A0A0A0MS02 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC12.2□□□□□ -0.46
TRGV1A0A0A0MS02 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV1A0A0A0MS02 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC12.2□□□□□ -0.46
TRGV1A0A0A0MS02 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV1A0A0A0MS02 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV1A0A0A0MS02 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV1A0A0A0MS02 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV1A0A0A0MS02 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV1A0A0A0MS02 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV1A0A0A0MS02 PI4KAP1-204ENST00000612579 1703 ntBASIC12.2□□□□□ -0.46
TRGV1A0A0A0MS02 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC12.2□□□□□ -0.46
TRGV1A0A0A0MS02 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC12.2□□□□□ -0.46
TRGV1A0A0A0MS02 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC12.2□□□□□ -0.46
TRGV1A0A0A0MS02 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
TRGV1A0A0A0MS02 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC12.2□□□□□ -0.46
TRGV1A0A0A0MS02 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV1A0A0A0MS02 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV1A0A0A0MS02 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC12.2□□□□□ -0.46
TRGV1A0A0A0MS02 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV1A0A0A0MS02 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV1A0A0A0MS02 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV1A0A0A0MS02 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV1A0A0A0MS02 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV1A0A0A0MS02 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC12.2□□□□□ -0.46
TRGV1A0A0A0MS02 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV1A0A0A0MS02 AP002414.1-201ENST00000391405 1147 ntBASIC12.2□□□□□ -0.46
TRGV1A0A0A0MS02 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC12.2□□□□□ -0.46
TRGV1A0A0A0MS02 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC12.2□□□□□ -0.46
TRGV1A0A0A0MS02 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC12.2□□□□□ -0.46
TRGV1A0A0A0MS02 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC12.2□□□□□ -0.46
TRGV1A0A0A0MS02 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
TRGV1A0A0A0MS02 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC12.2□□□□□ -0.46
TRGV1A0A0A0MS02 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC12.2□□□□□ -0.46
TRGV1A0A0A0MS02 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC12.2□□□□□ -0.46
TRGV1A0A0A0MS02 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC12.2□□□□□ -0.46
TRGV1A0A0A0MS02 OR7E14P-202ENST00000530490 1290 ntBASIC12.2□□□□□ -0.46
TRGV1A0A0A0MS02 TOLLIP-AS1-201ENST00000530897 939 ntBASIC12.2□□□□□ -0.46
TRGV1A0A0A0MS02 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC12.2□□□□□ -0.46
TRGV1A0A0A0MS02 BMF-207ENST00000559701 630 ntTSL 3 BASIC12.2□□□□□ -0.46
TRGV1A0A0A0MS02 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
TRGV1A0A0A0MS02 TERC-201ENST00000602385 541 ntBASIC12.2□□□□□ -0.46
TRGV1A0A0A0MS02 AC025062.2-201ENST00000605477 670 ntBASIC12.2□□□□□ -0.46
TRGV1A0A0A0MS02 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC12.2□□□□□ -0.46
TRGV1A0A0A0MS02 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV1A0A0A0MS02 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
TRGV1A0A0A0MS02 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC12.2□□□□□ -0.46
TRGV1A0A0A0MS02 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV1A0A0A0MS02 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC12.2□□□□□ -0.46
TRGV1A0A0A0MS02 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV1A0A0A0MS02 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV1A0A0A0MS02 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC12.2□□□□□ -0.46
TRGV1A0A0A0MS02 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC12.2□□□□□ -0.46
TRGV1A0A0A0MS02 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV1A0A0A0MS02 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
TRGV1A0A0A0MS02 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV1A0A0A0MS02 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC12.2□□□□□ -0.46
TRGV1A0A0A0MS02 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV1A0A0A0MS02 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV1A0A0A0MS02 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV1A0A0A0MS02 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
TRGV1A0A0A0MS02 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV1A0A0A0MS02 AC078925.2-201ENST00000624013 1973 ntBASIC12.19□□□□□ -0.46
TRGV1A0A0A0MS02 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
TRGV1A0A0A0MS02 OS9-205ENST00000413095 1660 ntTSL 2 BASIC12.19□□□□□ -0.46
TRGV1A0A0A0MS02 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
TRGV1A0A0A0MS02 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC12.19□□□□□ -0.46
TRGV1A0A0A0MS02 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
TRGV1A0A0A0MS02 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
TRGV1A0A0A0MS02 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
TRGV1A0A0A0MS02 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
TRGV1A0A0A0MS02 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TRGV1A0A0A0MS02 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
TRGV1A0A0A0MS02 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC12.19□□□□□ -0.46
TRGV1A0A0A0MS02 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TRGV1A0A0A0MS02 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
TRGV1A0A0A0MS02 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TRGV1A0A0A0MS02 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TRGV1A0A0A0MS02 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TRGV1A0A0A0MS02 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TRGV1A0A0A0MS02 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
TRGV1A0A0A0MS02 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
TRGV1A0A0A0MS02 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TRGV1A0A0A0MS02 EMBP1-201ENST00000458200 901 ntBASIC12.19□□□□□ -0.46
TRGV1A0A0A0MS02 ARTN-206ENST00000472435 402 ntTSL 3 BASIC12.19□□□□□ -0.46
TRGV1A0A0A0MS02 UNC93B7-201ENST00000509439 705 ntBASIC12.19□□□□□ -0.46
TRGV1A0A0A0MS02 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC12.19□□□□□ -0.46
TRGV1A0A0A0MS02 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TRGV1A0A0A0MS02 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC12.19□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms