Protein–RNA interactions for Protein: Q9Y620

RAD54B, DNA repair and recombination protein RAD54B, humanhuman

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD54BQ9Y620 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
RAD54BQ9Y620 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
RAD54BQ9Y620 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
RAD54BQ9Y620 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
RAD54BQ9Y620 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.38
RAD54BQ9Y620 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.39■□□□□ 0.37
RAD54BQ9Y620 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RAD54BQ9Y620 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAD54BQ9Y620 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAD54BQ9Y620 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
RAD54BQ9Y620 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RAD54BQ9Y620 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAD54BQ9Y620 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAD54BQ9Y620 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.39■□□□□ 0.37
RAD54BQ9Y620 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
RAD54BQ9Y620 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.39■□□□□ 0.37
RAD54BQ9Y620 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.39■□□□□ 0.37
RAD54BQ9Y620 SLC25A6P2-201ENST00000497974 877 ntBASIC17.39■□□□□ 0.37
RAD54BQ9Y620 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RAD54BQ9Y620 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAD54BQ9Y620 AC091167.2-201ENST00000579581 588 ntBASIC17.39■□□□□ 0.37
RAD54BQ9Y620 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.39■□□□□ 0.37
RAD54BQ9Y620 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.39■□□□□ 0.37
RAD54BQ9Y620 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.39■□□□□ 0.37
RAD54BQ9Y620 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAD54BQ9Y620 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
RAD54BQ9Y620 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.39■□□□□ 0.37
RAD54BQ9Y620 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.39■□□□□ 0.37
RAD54BQ9Y620 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.39■□□□□ 0.37
RAD54BQ9Y620 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.39■□□□□ 0.37
RAD54BQ9Y620 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
RAD54BQ9Y620 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAD54BQ9Y620 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAD54BQ9Y620 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAD54BQ9Y620 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.39■□□□□ 0.37
RAD54BQ9Y620 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
RAD54BQ9Y620 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RAD54BQ9Y620 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RAD54BQ9Y620 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
RAD54BQ9Y620 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAD54BQ9Y620 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RAD54BQ9Y620 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
RAD54BQ9Y620 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAD54BQ9Y620 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.38■□□□□ 0.37
RAD54BQ9Y620 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.38■□□□□ 0.37
RAD54BQ9Y620 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.38■□□□□ 0.37
RAD54BQ9Y620 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.38■□□□□ 0.37
RAD54BQ9Y620 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
RAD54BQ9Y620 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RAD54BQ9Y620 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.38■□□□□ 0.37
RAD54BQ9Y620 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.38■□□□□ 0.37
RAD54BQ9Y620 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.38■□□□□ 0.37
RAD54BQ9Y620 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RAD54BQ9Y620 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.38■□□□□ 0.37
RAD54BQ9Y620 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAD54BQ9Y620 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAD54BQ9Y620 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAD54BQ9Y620 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAD54BQ9Y620 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.38■□□□□ 0.37
RAD54BQ9Y620 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.38■□□□□ 0.37
RAD54BQ9Y620 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
RAD54BQ9Y620 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
RAD54BQ9Y620 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAD54BQ9Y620 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAD54BQ9Y620 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
RAD54BQ9Y620 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.38■□□□□ 0.37
RAD54BQ9Y620 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAD54BQ9Y620 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.38■□□□□ 0.37
RAD54BQ9Y620 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAD54BQ9Y620 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
RAD54BQ9Y620 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.37■□□□□ 0.37
RAD54BQ9Y620 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAD54BQ9Y620 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
RAD54BQ9Y620 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.37■□□□□ 0.37
RAD54BQ9Y620 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.37■□□□□ 0.37
RAD54BQ9Y620 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAD54BQ9Y620 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
RAD54BQ9Y620 RNF216P1-203ENST00000404404 2427 ntBASIC17.37■□□□□ 0.37
RAD54BQ9Y620 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RAD54BQ9Y620 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
RAD54BQ9Y620 FLJ38576-201ENST00000623820 2459 ntBASIC17.37■□□□□ 0.37
RAD54BQ9Y620 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
RAD54BQ9Y620 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RAD54BQ9Y620 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAD54BQ9Y620 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAD54BQ9Y620 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
RAD54BQ9Y620 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.37■□□□□ 0.37
RAD54BQ9Y620 FAM185BP-201ENST00000443595 716 ntBASIC17.37■□□□□ 0.37
RAD54BQ9Y620 AL513480.1-201ENST00000451731 511 ntBASIC17.37■□□□□ 0.37
RAD54BQ9Y620 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAD54BQ9Y620 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
RAD54BQ9Y620 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAD54BQ9Y620 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
RAD54BQ9Y620 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
RAD54BQ9Y620 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAD54BQ9Y620 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.37■□□□□ 0.37
RAD54BQ9Y620 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.37■□□□□ 0.37
RAD54BQ9Y620 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.37■□□□□ 0.37
RAD54BQ9Y620 AC027612.4-201ENST00000605371 583 ntBASIC17.37■□□□□ 0.37
RAD54BQ9Y620 AC068137.2-201ENST00000605408 478 ntBASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms