Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.7■□□□□ 0.1
PCDHGA9Q9Y5G4 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGA9Q9Y5G4 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGA9Q9Y5G4 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.69■□□□□ 0.1
PCDHGA9Q9Y5G4 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.69■□□□□ 0.1
PCDHGA9Q9Y5G4 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
PCDHGA9Q9Y5G4 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
PCDHGA9Q9Y5G4 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGA9Q9Y5G4 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.69■□□□□ 0.1
PCDHGA9Q9Y5G4 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.69■□□□□ 0.1
PCDHGA9Q9Y5G4 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
PCDHGA9Q9Y5G4 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGA9Q9Y5G4 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
PCDHGA9Q9Y5G4 CROCCP2-202ENST00000412962 2773 ntBASIC15.69■□□□□ 0.1
PCDHGA9Q9Y5G4 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGA9Q9Y5G4 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGA9Q9Y5G4 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGA9Q9Y5G4 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGA9Q9Y5G4 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC15.69■□□□□ 0.1
PCDHGA9Q9Y5G4 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.69■□□□□ 0.1
PCDHGA9Q9Y5G4 KRT18P32-201ENST00000424695 1287 ntBASIC15.69■□□□□ 0.1
PCDHGA9Q9Y5G4 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC15.69■□□□□ 0.1
PCDHGA9Q9Y5G4 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGA9Q9Y5G4 AC093214.1-201ENST00000511688 1107 ntBASIC15.69■□□□□ 0.1
PCDHGA9Q9Y5G4 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.69■□□□□ 0.1
PCDHGA9Q9Y5G4 AC069262.1-201ENST00000539058 672 ntBASIC15.69■□□□□ 0.1
PCDHGA9Q9Y5G4 AC051619.7-201ENST00000568314 623 ntBASIC15.69■□□□□ 0.1
PCDHGA9Q9Y5G4 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC15.69■□□□□ 0.1
PCDHGA9Q9Y5G4 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGA9Q9Y5G4 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC15.69■□□□□ 0.1
PCDHGA9Q9Y5G4 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGA9Q9Y5G4 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.69■□□□□ 0.1
PCDHGA9Q9Y5G4 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC15.69■□□□□ 0.1
PCDHGA9Q9Y5G4 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGA9Q9Y5G4 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
PCDHGA9Q9Y5G4 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.69■□□□□ 0.1
PCDHGA9Q9Y5G4 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.69■□□□□ 0.1
PCDHGA9Q9Y5G4 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
PCDHGA9Q9Y5G4 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGA9Q9Y5G4 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGA9Q9Y5G4 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
PCDHGA9Q9Y5G4 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
PCDHGA9Q9Y5G4 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHGA9Q9Y5G4 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHGA9Q9Y5G4 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.68■□□□□ 0.1
PCDHGA9Q9Y5G4 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC15.68■□□□□ 0.1
PCDHGA9Q9Y5G4 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHGA9Q9Y5G4 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
PCDHGA9Q9Y5G4 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
PCDHGA9Q9Y5G4 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.68■□□□□ 0.1
PCDHGA9Q9Y5G4 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHGA9Q9Y5G4 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHGA9Q9Y5G4 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
PCDHGA9Q9Y5G4 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
PCDHGA9Q9Y5G4 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC15.68■□□□□ 0.1
PCDHGA9Q9Y5G4 VMA21-202ENST00000370361 693 ntTSL 5 BASIC15.68■□□□□ 0.1
PCDHGA9Q9Y5G4 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHGA9Q9Y5G4 BASP1P1-201ENST00000430708 665 ntBASIC15.68■□□□□ 0.1
PCDHGA9Q9Y5G4 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.68■□□□□ 0.1
PCDHGA9Q9Y5G4 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC15.68■□□□□ 0.1
PCDHGA9Q9Y5G4 TAF8-206ENST00000472818 719 ntTSL 2 BASIC15.68■□□□□ 0.1
PCDHGA9Q9Y5G4 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.68■□□□□ 0.1
PCDHGA9Q9Y5G4 AC243562.1-201ENST00000560672 389 ntBASIC15.68■□□□□ 0.1
PCDHGA9Q9Y5G4 AL135744.1-201ENST00000565098 629 ntBASIC15.68■□□□□ 0.1
PCDHGA9Q9Y5G4 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHGA9Q9Y5G4 AL390955.2-201ENST00000603032 514 ntBASIC15.68■□□□□ 0.1
PCDHGA9Q9Y5G4 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHGA9Q9Y5G4 LINC01451-201ENST00000623792 534 ntBASIC15.68■□□□□ 0.1
PCDHGA9Q9Y5G4 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHGA9Q9Y5G4 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHGA9Q9Y5G4 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHGA9Q9Y5G4 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHGA9Q9Y5G4 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
PCDHGA9Q9Y5G4 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.68■□□□□ 0.1
PCDHGA9Q9Y5G4 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHGA9Q9Y5G4 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHGA9Q9Y5G4 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.68■□□□□ 0.1
PCDHGA9Q9Y5G4 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHGA9Q9Y5G4 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.68■□□□□ 0.1
PCDHGA9Q9Y5G4 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
PCDHGA9Q9Y5G4 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHGA9Q9Y5G4 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
PCDHGA9Q9Y5G4 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHGA9Q9Y5G4 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHGA9Q9Y5G4 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
PCDHGA9Q9Y5G4 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHGA9Q9Y5G4 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHGA9Q9Y5G4 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.67■□□□□ 0.1
PCDHGA9Q9Y5G4 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHGA9Q9Y5G4 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHGA9Q9Y5G4 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHGA9Q9Y5G4 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC15.67■□□□□ 0.1
PCDHGA9Q9Y5G4 AC244107.1-201ENST00000442033 332 ntBASIC15.67■□□□□ 0.1
PCDHGA9Q9Y5G4 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.67■□□□□ 0.1
PCDHGA9Q9Y5G4 INGX-202ENST00000489074 768 ntBASIC15.67■□□□□ 0.1
PCDHGA9Q9Y5G4 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC15.67■□□□□ 0.1
PCDHGA9Q9Y5G4 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.67■□□□□ 0.1
PCDHGA9Q9Y5G4 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.67■□□□□ 0.1
PCDHGA9Q9Y5G4 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.67■□□□□ 0.1
PCDHGA9Q9Y5G4 DUX4L27-201ENST00000554796 1261 ntBASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms