Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
AP4E1Q9UPM8 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
AP4E1Q9UPM8 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.38■□□□□ 0.37
AP4E1Q9UPM8 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP4E1Q9UPM8 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP4E1Q9UPM8 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
AP4E1Q9UPM8 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP4E1Q9UPM8 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
AP4E1Q9UPM8 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.38■□□□□ 0.37
AP4E1Q9UPM8 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
AP4E1Q9UPM8 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.38■□□□□ 0.37
AP4E1Q9UPM8 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP4E1Q9UPM8 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP4E1Q9UPM8 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP4E1Q9UPM8 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP4E1Q9UPM8 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP4E1Q9UPM8 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
AP4E1Q9UPM8 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.38■□□□□ 0.37
AP4E1Q9UPM8 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP4E1Q9UPM8 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.38■□□□□ 0.37
AP4E1Q9UPM8 BX640515.1-201ENST00000617215 977 ntBASIC17.38■□□□□ 0.37
AP4E1Q9UPM8 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.38■□□□□ 0.37
AP4E1Q9UPM8 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
AP4E1Q9UPM8 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
AP4E1Q9UPM8 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
AP4E1Q9UPM8 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP4E1Q9UPM8 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.38■□□□□ 0.37
AP4E1Q9UPM8 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP4E1Q9UPM8 AL512652.2-201ENST00000625156 1716 ntBASIC17.38■□□□□ 0.37
AP4E1Q9UPM8 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
AP4E1Q9UPM8 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
AP4E1Q9UPM8 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP4E1Q9UPM8 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP4E1Q9UPM8 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP4E1Q9UPM8 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.38■□□□□ 0.37
AP4E1Q9UPM8 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP4E1Q9UPM8 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP4E1Q9UPM8 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP4E1Q9UPM8 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.38■□□□□ 0.37
AP4E1Q9UPM8 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP4E1Q9UPM8 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
AP4E1Q9UPM8 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
AP4E1Q9UPM8 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.37■□□□□ 0.37
AP4E1Q9UPM8 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
AP4E1Q9UPM8 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
AP4E1Q9UPM8 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.37■□□□□ 0.37
AP4E1Q9UPM8 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
AP4E1Q9UPM8 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
AP4E1Q9UPM8 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
AP4E1Q9UPM8 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
AP4E1Q9UPM8 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
AP4E1Q9UPM8 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
AP4E1Q9UPM8 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
AP4E1Q9UPM8 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.37■□□□□ 0.37
AP4E1Q9UPM8 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
AP4E1Q9UPM8 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
AP4E1Q9UPM8 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
AP4E1Q9UPM8 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
AP4E1Q9UPM8 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
AP4E1Q9UPM8 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.37■□□□□ 0.37
AP4E1Q9UPM8 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
AP4E1Q9UPM8 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
AP4E1Q9UPM8 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.37■□□□□ 0.37
AP4E1Q9UPM8 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
AP4E1Q9UPM8 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
AP4E1Q9UPM8 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.37■□□□□ 0.37
AP4E1Q9UPM8 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.37■□□□□ 0.37
AP4E1Q9UPM8 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.37■□□□□ 0.37
AP4E1Q9UPM8 SLC25A1P1-201ENST00000528351 927 ntBASIC17.37■□□□□ 0.37
AP4E1Q9UPM8 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.37■□□□□ 0.37
AP4E1Q9UPM8 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
AP4E1Q9UPM8 MIR4515-201ENST00000584082 81 ntBASIC17.37■□□□□ 0.37
AP4E1Q9UPM8 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.37■□□□□ 0.37
AP4E1Q9UPM8 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.37■□□□□ 0.37
AP4E1Q9UPM8 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
AP4E1Q9UPM8 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
AP4E1Q9UPM8 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.37■□□□□ 0.37
AP4E1Q9UPM8 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
AP4E1Q9UPM8 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
AP4E1Q9UPM8 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
AP4E1Q9UPM8 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
AP4E1Q9UPM8 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
AP4E1Q9UPM8 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
AP4E1Q9UPM8 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
AP4E1Q9UPM8 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
AP4E1Q9UPM8 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.36■□□□□ 0.37
AP4E1Q9UPM8 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
AP4E1Q9UPM8 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.36■□□□□ 0.37
AP4E1Q9UPM8 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.36■□□□□ 0.37
AP4E1Q9UPM8 AC007967.2-201ENST00000432613 625 ntBASIC17.36■□□□□ 0.37
AP4E1Q9UPM8 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
AP4E1Q9UPM8 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.36■□□□□ 0.37
AP4E1Q9UPM8 AC096734.2-201ENST00000562054 433 ntBASIC17.36■□□□□ 0.37
AP4E1Q9UPM8 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.36■□□□□ 0.37
AP4E1Q9UPM8 AC064836.3-201ENST00000607928 673 ntBASIC17.36■□□□□ 0.37
AP4E1Q9UPM8 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.36■□□□□ 0.37
AP4E1Q9UPM8 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
AP4E1Q9UPM8 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
AP4E1Q9UPM8 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
AP4E1Q9UPM8 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms