Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
EBF1Q9UH73 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
EBF1Q9UH73 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EBF1Q9UH73 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
EBF1Q9UH73 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
EBF1Q9UH73 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
EBF1Q9UH73 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
EBF1Q9UH73 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
EBF1Q9UH73 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
EBF1Q9UH73 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
EBF1Q9UH73 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.08■□□□□ 0.33
EBF1Q9UH73 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
EBF1Q9UH73 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
EBF1Q9UH73 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
EBF1Q9UH73 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
EBF1Q9UH73 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
EBF1Q9UH73 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
EBF1Q9UH73 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
EBF1Q9UH73 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC17.08■□□□□ 0.32
EBF1Q9UH73 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
EBF1Q9UH73 METTL26-204ENST00000397665 558 ntTSL 2 BASIC17.08■□□□□ 0.32
EBF1Q9UH73 HMGA1P7-201ENST00000406908 502 ntBASIC17.08■□□□□ 0.32
EBF1Q9UH73 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.08■□□□□ 0.32
EBF1Q9UH73 RBPMS2P1-201ENST00000437762 623 ntBASIC17.08■□□□□ 0.32
EBF1Q9UH73 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC17.08■□□□□ 0.32
EBF1Q9UH73 AC002472.2-201ENST00000442739 958 ntBASIC17.08■□□□□ 0.32
EBF1Q9UH73 FAM207CP-201ENST00000443486 507 ntBASIC17.08■□□□□ 0.32
EBF1Q9UH73 TSPY16P-201ENST00000449843 468 ntBASIC17.08■□□□□ 0.32
EBF1Q9UH73 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC17.08■□□□□ 0.32
EBF1Q9UH73 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC17.08■□□□□ 0.32
EBF1Q9UH73 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.08■□□□□ 0.32
EBF1Q9UH73 POLD4-211ENST00000539074 714 ntTSL 3 BASIC17.08■□□□□ 0.32
EBF1Q9UH73 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.08■□□□□ 0.32
EBF1Q9UH73 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.08■□□□□ 0.32
EBF1Q9UH73 RN7SL204P-201ENST00000582831 262 ntBASIC17.08■□□□□ 0.32
EBF1Q9UH73 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
EBF1Q9UH73 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.08■□□□□ 0.32
EBF1Q9UH73 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.08■□□□□ 0.32
EBF1Q9UH73 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.08■□□□□ 0.32
EBF1Q9UH73 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
EBF1Q9UH73 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
EBF1Q9UH73 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
EBF1Q9UH73 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
EBF1Q9UH73 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
EBF1Q9UH73 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
EBF1Q9UH73 PCDH8P1-201ENST00000428983 2773 ntBASIC17.07■□□□□ 0.32
EBF1Q9UH73 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
EBF1Q9UH73 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
EBF1Q9UH73 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.07■□□□□ 0.32
EBF1Q9UH73 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC17.07■□□□□ 0.32
EBF1Q9UH73 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
EBF1Q9UH73 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
EBF1Q9UH73 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.07■□□□□ 0.32
EBF1Q9UH73 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
EBF1Q9UH73 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.07■□□□□ 0.32
EBF1Q9UH73 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
EBF1Q9UH73 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
EBF1Q9UH73 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.07■□□□□ 0.32
EBF1Q9UH73 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
EBF1Q9UH73 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.07■□□□□ 0.32
EBF1Q9UH73 AC236430.1-201ENST00000402231 743 ntBASIC17.07■□□□□ 0.32
EBF1Q9UH73 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.07■□□□□ 0.32
EBF1Q9UH73 SPDYE7P-202ENST00000420373 878 ntBASIC17.07■□□□□ 0.32
EBF1Q9UH73 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
EBF1Q9UH73 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.07■□□□□ 0.32
EBF1Q9UH73 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
EBF1Q9UH73 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
EBF1Q9UH73 AC125807.1-201ENST00000483097 614 ntBASIC17.07■□□□□ 0.32
EBF1Q9UH73 IGHV3-62-201ENST00000520057 340 ntBASIC17.07■□□□□ 0.32
EBF1Q9UH73 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.07■□□□□ 0.32
EBF1Q9UH73 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.07■□□□□ 0.32
EBF1Q9UH73 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.07■□□□□ 0.32
EBF1Q9UH73 RBM7-207ENST00000544582 692 ntTSL 3 BASIC17.07■□□□□ 0.32
EBF1Q9UH73 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.07■□□□□ 0.32
EBF1Q9UH73 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC17.07■□□□□ 0.32
EBF1Q9UH73 YTHDF3-AS1-201ENST00000603538 718 ntBASIC17.07■□□□□ 0.32
EBF1Q9UH73 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
EBF1Q9UH73 AL035252.4-201ENST00000624174 288 ntBASIC17.07■□□□□ 0.32
EBF1Q9UH73 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
EBF1Q9UH73 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
EBF1Q9UH73 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
EBF1Q9UH73 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
EBF1Q9UH73 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
EBF1Q9UH73 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.07■□□□□ 0.32
EBF1Q9UH73 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
EBF1Q9UH73 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.06■□□□□ 0.32
EBF1Q9UH73 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
EBF1Q9UH73 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.06■□□□□ 0.32
EBF1Q9UH73 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
EBF1Q9UH73 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
EBF1Q9UH73 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.06■□□□□ 0.32
EBF1Q9UH73 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
EBF1Q9UH73 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
EBF1Q9UH73 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
EBF1Q9UH73 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
EBF1Q9UH73 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
EBF1Q9UH73 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.06■□□□□ 0.32
EBF1Q9UH73 HNRNPA1P40-201ENST00000426371 1278 ntBASIC17.06■□□□□ 0.32
EBF1Q9UH73 AC005034.1-201ENST00000426657 489 ntBASIC17.06■□□□□ 0.32
EBF1Q9UH73 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms