Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
NCDNQ9UBB6 U1.21-201ENST00000580816 167 ntBASIC16.58■□□□□ 0.24
NCDNQ9UBB6 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC16.58■□□□□ 0.24
NCDNQ9UBB6 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.58■□□□□ 0.24
NCDNQ9UBB6 PFAS-212ENST00000625942 396 ntTSL 5 BASIC16.58■□□□□ 0.24
NCDNQ9UBB6 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC16.58■□□□□ 0.24
NCDNQ9UBB6 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NCDNQ9UBB6 AL353732.1-201ENST00000569618 1459 ntBASIC16.58■□□□□ 0.24
NCDNQ9UBB6 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
NCDNQ9UBB6 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.58■□□□□ 0.24
NCDNQ9UBB6 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
NCDNQ9UBB6 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NCDNQ9UBB6 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.58■□□□□ 0.24
NCDNQ9UBB6 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
NCDNQ9UBB6 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.58■□□□□ 0.24
NCDNQ9UBB6 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
NCDNQ9UBB6 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
NCDNQ9UBB6 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NCDNQ9UBB6 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NCDNQ9UBB6 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NCDNQ9UBB6 AP000997.3-201ENST00000623333 2250 ntBASIC16.58■□□□□ 0.24
NCDNQ9UBB6 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.58■□□□□ 0.24
NCDNQ9UBB6 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NCDNQ9UBB6 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NCDNQ9UBB6 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NCDNQ9UBB6 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
NCDNQ9UBB6 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.57■□□□□ 0.24
NCDNQ9UBB6 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NCDNQ9UBB6 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NCDNQ9UBB6 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NCDNQ9UBB6 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NCDNQ9UBB6 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NCDNQ9UBB6 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NCDNQ9UBB6 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NCDNQ9UBB6 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NCDNQ9UBB6 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NCDNQ9UBB6 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
NCDNQ9UBB6 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NCDNQ9UBB6 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NCDNQ9UBB6 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NCDNQ9UBB6 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
NCDNQ9UBB6 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC16.57■□□□□ 0.24
NCDNQ9UBB6 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.57■□□□□ 0.24
NCDNQ9UBB6 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NCDNQ9UBB6 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
NCDNQ9UBB6 AC093004.1-201ENST00000508850 424 ntBASIC16.57■□□□□ 0.24
NCDNQ9UBB6 AL138918.1-201ENST00000568306 659 ntBASIC16.57■□□□□ 0.24
NCDNQ9UBB6 RN7SL219P-201ENST00000582872 296 ntBASIC16.57■□□□□ 0.24
NCDNQ9UBB6 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NCDNQ9UBB6 AL844908.2-201ENST00000609461 460 ntBASIC16.57■□□□□ 0.24
NCDNQ9UBB6 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NCDNQ9UBB6 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.57■□□□□ 0.24
NCDNQ9UBB6 COX11-210ENST00000639671 696 ntBASIC16.57■□□□□ 0.24
NCDNQ9UBB6 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NCDNQ9UBB6 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NCDNQ9UBB6 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NCDNQ9UBB6 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NCDNQ9UBB6 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NCDNQ9UBB6 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
NCDNQ9UBB6 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.57■□□□□ 0.24
NCDNQ9UBB6 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NCDNQ9UBB6 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NCDNQ9UBB6 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NCDNQ9UBB6 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NCDNQ9UBB6 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
NCDNQ9UBB6 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NCDNQ9UBB6 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NCDNQ9UBB6 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NCDNQ9UBB6 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NCDNQ9UBB6 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NCDNQ9UBB6 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NCDNQ9UBB6 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.56■□□□□ 0.24
NCDNQ9UBB6 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.56■□□□□ 0.24
NCDNQ9UBB6 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.56■□□□□ 0.24
NCDNQ9UBB6 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NCDNQ9UBB6 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.56■□□□□ 0.24
NCDNQ9UBB6 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
NCDNQ9UBB6 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC16.56■□□□□ 0.24
NCDNQ9UBB6 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
NCDNQ9UBB6 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NCDNQ9UBB6 LTB4R2-202ENST00000528054 3092 ntBASIC16.56■□□□□ 0.24
NCDNQ9UBB6 SPDYE19P-201ENST00000338590 713 ntBASIC16.56■□□□□ 0.24
NCDNQ9UBB6 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NCDNQ9UBB6 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
NCDNQ9UBB6 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC16.56■□□□□ 0.24
NCDNQ9UBB6 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NCDNQ9UBB6 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC16.56■□□□□ 0.24
NCDNQ9UBB6 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.56■□□□□ 0.24
NCDNQ9UBB6 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NCDNQ9UBB6 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC16.56■□□□□ 0.24
NCDNQ9UBB6 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.56■□□□□ 0.24
NCDNQ9UBB6 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.56■□□□□ 0.24
NCDNQ9UBB6 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
NCDNQ9UBB6 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.56■□□□□ 0.24
NCDNQ9UBB6 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
NCDNQ9UBB6 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
NCDNQ9UBB6 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NCDNQ9UBB6 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.56■□□□□ 0.24
NCDNQ9UBB6 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.56■□□□□ 0.24
NCDNQ9UBB6 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 246.7 ms