Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
SLC52A1Q9NWF4 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
SLC52A1Q9NWF4 AL589987.1-201ENST00000453380 819 ntBASIC23.66■■□□□ 1.38
SLC52A1Q9NWF4 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC23.66■■□□□ 1.38
SLC52A1Q9NWF4 AC123567.1-201ENST00000548294 1261 ntBASIC23.66■■□□□ 1.38
SLC52A1Q9NWF4 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC23.66■■□□□ 1.38
SLC52A1Q9NWF4 RRP7BP-205ENST00000566851 833 ntBASIC23.66■■□□□ 1.38
SLC52A1Q9NWF4 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC23.66■■□□□ 1.38
SLC52A1Q9NWF4 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC23.66■■□□□ 1.38
SLC52A1Q9NWF4 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
SLC52A1Q9NWF4 AC093726.1-201ENST00000608064 963 ntBASIC23.66■■□□□ 1.38
SLC52A1Q9NWF4 AL512652.2-201ENST00000625156 1716 ntBASIC23.66■■□□□ 1.38
SLC52A1Q9NWF4 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SLC52A1Q9NWF4 AL390961.4-201ENST00000623958 2535 ntBASIC23.66■■□□□ 1.38
SLC52A1Q9NWF4 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
SLC52A1Q9NWF4 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SLC52A1Q9NWF4 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SLC52A1Q9NWF4 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
SLC52A1Q9NWF4 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
SLC52A1Q9NWF4 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SLC52A1Q9NWF4 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SLC52A1Q9NWF4 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
SLC52A1Q9NWF4 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SLC52A1Q9NWF4 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SLC52A1Q9NWF4 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SLC52A1Q9NWF4 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SLC52A1Q9NWF4 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
SLC52A1Q9NWF4 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SLC52A1Q9NWF4 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC23.65■■□□□ 1.38
SLC52A1Q9NWF4 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC23.65■■□□□ 1.38
SLC52A1Q9NWF4 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC23.65■■□□□ 1.38
SLC52A1Q9NWF4 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SLC52A1Q9NWF4 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC23.65■■□□□ 1.38
SLC52A1Q9NWF4 AL512343.1-201ENST00000605837 169 ntBASIC23.65■■□□□ 1.38
SLC52A1Q9NWF4 AL109936.8-201ENST00000641772 604 ntBASIC23.65■■□□□ 1.38
SLC52A1Q9NWF4 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC23.65■■□□□ 1.38
SLC52A1Q9NWF4 AC134043.2-201ENST00000624206 2238 ntBASIC23.65■■□□□ 1.38
SLC52A1Q9NWF4 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SLC52A1Q9NWF4 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SLC52A1Q9NWF4 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SLC52A1Q9NWF4 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SLC52A1Q9NWF4 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC23.65■■□□□ 1.38
SLC52A1Q9NWF4 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SLC52A1Q9NWF4 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
SLC52A1Q9NWF4 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC23.65■■□□□ 1.38
SLC52A1Q9NWF4 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
SLC52A1Q9NWF4 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SLC52A1Q9NWF4 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
SLC52A1Q9NWF4 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.38
SLC52A1Q9NWF4 CROCCP2-202ENST00000412962 2773 ntBASIC23.64■■□□□ 1.38
SLC52A1Q9NWF4 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
SLC52A1Q9NWF4 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.38
SLC52A1Q9NWF4 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.38
SLC52A1Q9NWF4 PCDHB17P-201ENST00000539533 2393 ntBASIC23.64■■□□□ 1.38
SLC52A1Q9NWF4 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
SLC52A1Q9NWF4 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC23.64■■□□□ 1.38
SLC52A1Q9NWF4 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC23.64■■□□□ 1.38
SLC52A1Q9NWF4 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
SLC52A1Q9NWF4 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
SLC52A1Q9NWF4 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SLC52A1Q9NWF4 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC23.64■■□□□ 1.37
SLC52A1Q9NWF4 AC098850.1-201ENST00000419919 790 ntBASIC23.64■■□□□ 1.37
SLC52A1Q9NWF4 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC23.64■■□□□ 1.37
SLC52A1Q9NWF4 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC23.64■■□□□ 1.37
SLC52A1Q9NWF4 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
SLC52A1Q9NWF4 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC23.64■■□□□ 1.37
SLC52A1Q9NWF4 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
SLC52A1Q9NWF4 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
SLC52A1Q9NWF4 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC23.64■■□□□ 1.37
SLC52A1Q9NWF4 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC23.64■■□□□ 1.37
SLC52A1Q9NWF4 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC23.64■■□□□ 1.37
SLC52A1Q9NWF4 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
SLC52A1Q9NWF4 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
SLC52A1Q9NWF4 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC23.64■■□□□ 1.37
SLC52A1Q9NWF4 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
SLC52A1Q9NWF4 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SLC52A1Q9NWF4 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC23.64■■□□□ 1.37
SLC52A1Q9NWF4 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC23.64■■□□□ 1.37
SLC52A1Q9NWF4 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC23.64■■□□□ 1.37
SLC52A1Q9NWF4 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
SLC52A1Q9NWF4 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC23.64■■□□□ 1.37
SLC52A1Q9NWF4 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC23.64■■□□□ 1.37
SLC52A1Q9NWF4 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC23.63■■□□□ 1.37
SLC52A1Q9NWF4 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SLC52A1Q9NWF4 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
SLC52A1Q9NWF4 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC23.63■■□□□ 1.37
SLC52A1Q9NWF4 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
SLC52A1Q9NWF4 NSL1-201ENST00000366976 722 ntTSL 2 BASIC23.63■■□□□ 1.37
SLC52A1Q9NWF4 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
SLC52A1Q9NWF4 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SLC52A1Q9NWF4 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SLC52A1Q9NWF4 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC23.63■■□□□ 1.37
SLC52A1Q9NWF4 AC119751.2-201ENST00000504529 210 ntBASIC23.63■■□□□ 1.37
SLC52A1Q9NWF4 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC23.63■■□□□ 1.37
SLC52A1Q9NWF4 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC23.63■■□□□ 1.37
SLC52A1Q9NWF4 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SLC52A1Q9NWF4 TMEM261P1-201ENST00000604899 340 ntBASIC23.63■■□□□ 1.37
SLC52A1Q9NWF4 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SLC52A1Q9NWF4 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC23.63■■□□□ 1.37
SLC52A1Q9NWF4 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms