Protein–RNA interactions for Protein: Q9NU39

FOXD4L1, Forkhead box protein D4-like 1, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4L1Q9NU39 AC138907.10-201ENST00000623708 983 ntBASIC20.35■□□□□ 0.85
FOXD4L1Q9NU39 AC009039.2-201ENST00000624524 529 ntBASIC20.35■□□□□ 0.85
FOXD4L1Q9NU39 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
FOXD4L1Q9NU39 FRMD8P1-201ENST00000440433 1524 ntBASIC20.35■□□□□ 0.85
FOXD4L1Q9NU39 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC20.35■□□□□ 0.85
FOXD4L1Q9NU39 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC20.35■□□□□ 0.85
FOXD4L1Q9NU39 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
FOXD4L1Q9NU39 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
FOXD4L1Q9NU39 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
FOXD4L1Q9NU39 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
FOXD4L1Q9NU39 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
FOXD4L1Q9NU39 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
FOXD4L1Q9NU39 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
FOXD4L1Q9NU39 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
FOXD4L1Q9NU39 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC20.35■□□□□ 0.85
FOXD4L1Q9NU39 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC20.35■□□□□ 0.85
FOXD4L1Q9NU39 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
FOXD4L1Q9NU39 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC20.34■□□□□ 0.85
FOXD4L1Q9NU39 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC20.34■□□□□ 0.85
FOXD4L1Q9NU39 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
FOXD4L1Q9NU39 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
FOXD4L1Q9NU39 AC005052.1-201ENST00000625181 2492 ntBASIC20.34■□□□□ 0.85
FOXD4L1Q9NU39 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
FOXD4L1Q9NU39 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
FOXD4L1Q9NU39 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
FOXD4L1Q9NU39 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC20.34■□□□□ 0.85
FOXD4L1Q9NU39 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC20.34■□□□□ 0.85
FOXD4L1Q9NU39 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
FOXD4L1Q9NU39 AL645728.1-201ENST00000366221 2101 ntBASIC20.34■□□□□ 0.85
FOXD4L1Q9NU39 OR2X1P-201ENST00000421144 687 ntBASIC20.34■□□□□ 0.85
FOXD4L1Q9NU39 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC20.34■□□□□ 0.85
FOXD4L1Q9NU39 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC20.34■□□□□ 0.85
FOXD4L1Q9NU39 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC20.34■□□□□ 0.85
FOXD4L1Q9NU39 AC124947.2-201ENST00000547118 1133 ntBASIC20.34■□□□□ 0.85
FOXD4L1Q9NU39 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC20.34■□□□□ 0.85
FOXD4L1Q9NU39 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
FOXD4L1Q9NU39 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC20.34■□□□□ 0.85
FOXD4L1Q9NU39 AC005336.2-201ENST00000593183 939 ntBASIC20.34■□□□□ 0.85
FOXD4L1Q9NU39 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
FOXD4L1Q9NU39 AC006011.2-201ENST00000621313 1158 ntBASIC20.34■□□□□ 0.85
FOXD4L1Q9NU39 AL359742.1-201ENST00000622497 540 ntBASIC20.34■□□□□ 0.85
FOXD4L1Q9NU39 AC124864.1-201ENST00000623408 392 ntBASIC20.34■□□□□ 0.85
FOXD4L1Q9NU39 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
FOXD4L1Q9NU39 HLA-A-202ENST00000376806 1854 ntBASIC20.34■□□□□ 0.85
FOXD4L1Q9NU39 AC125634.1-201ENST00000438758 1403 ntBASIC20.34■□□□□ 0.85
FOXD4L1Q9NU39 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
FOXD4L1Q9NU39 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC20.34■□□□□ 0.85
FOXD4L1Q9NU39 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
FOXD4L1Q9NU39 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC20.34■□□□□ 0.85
FOXD4L1Q9NU39 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
FOXD4L1Q9NU39 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
FOXD4L1Q9NU39 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
FOXD4L1Q9NU39 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
FOXD4L1Q9NU39 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC20.34■□□□□ 0.85
FOXD4L1Q9NU39 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC20.33■□□□□ 0.85
FOXD4L1Q9NU39 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC20.33■□□□□ 0.85
FOXD4L1Q9NU39 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
FOXD4L1Q9NU39 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
FOXD4L1Q9NU39 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
FOXD4L1Q9NU39 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
FOXD4L1Q9NU39 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
FOXD4L1Q9NU39 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC20.33■□□□□ 0.85
FOXD4L1Q9NU39 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC20.33■□□□□ 0.85
FOXD4L1Q9NU39 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
FOXD4L1Q9NU39 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
FOXD4L1Q9NU39 GCNT6-201ENST00000379591 934 ntBASIC20.33■□□□□ 0.85
FOXD4L1Q9NU39 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.33■□□□□ 0.85
FOXD4L1Q9NU39 AC068733.1-201ENST00000532430 1288 ntTSL 2 BASIC20.33■□□□□ 0.85
FOXD4L1Q9NU39 AC073611.1-201ENST00000550263 647 ntTSL 2 BASIC20.33■□□□□ 0.85
FOXD4L1Q9NU39 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC20.33■□□□□ 0.85
FOXD4L1Q9NU39 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.33■□□□□ 0.85
FOXD4L1Q9NU39 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
FOXD4L1Q9NU39 AC022919.1-201ENST00000624979 626 ntBASIC20.33■□□□□ 0.85
FOXD4L1Q9NU39 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC20.33■□□□□ 0.85
FOXD4L1Q9NU39 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC20.33■□□□□ 0.84
FOXD4L1Q9NU39 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
FOXD4L1Q9NU39 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
FOXD4L1Q9NU39 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
FOXD4L1Q9NU39 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC20.33■□□□□ 0.84
FOXD4L1Q9NU39 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.84
FOXD4L1Q9NU39 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC20.33■□□□□ 0.84
FOXD4L1Q9NU39 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
FOXD4L1Q9NU39 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC20.32■□□□□ 0.84
FOXD4L1Q9NU39 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
FOXD4L1Q9NU39 AL596257.1-201ENST00000641463 2694 ntBASIC20.32■□□□□ 0.84
FOXD4L1Q9NU39 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
FOXD4L1Q9NU39 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
FOXD4L1Q9NU39 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
FOXD4L1Q9NU39 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
FOXD4L1Q9NU39 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.32■□□□□ 0.84
FOXD4L1Q9NU39 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
FOXD4L1Q9NU39 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
FOXD4L1Q9NU39 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC20.32■□□□□ 0.84
FOXD4L1Q9NU39 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC20.32■□□□□ 0.84
FOXD4L1Q9NU39 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC20.32■□□□□ 0.84
FOXD4L1Q9NU39 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
FOXD4L1Q9NU39 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
FOXD4L1Q9NU39 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
FOXD4L1Q9NU39 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
FOXD4L1Q9NU39 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms