Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 TEX28P2-201ENST00000617764 1221 ntBASIC17.68■□□□□ 0.42
TLR9Q9NR96 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TLR9Q9NR96 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.68■□□□□ 0.42
TLR9Q9NR96 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TLR9Q9NR96 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.68■□□□□ 0.42
TLR9Q9NR96 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TLR9Q9NR96 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.68■□□□□ 0.42
TLR9Q9NR96 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TLR9Q9NR96 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.68■□□□□ 0.42
TLR9Q9NR96 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TLR9Q9NR96 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.68■□□□□ 0.42
TLR9Q9NR96 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TLR9Q9NR96 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TLR9Q9NR96 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TLR9Q9NR96 FRMD8P1-201ENST00000440433 1524 ntBASIC17.67■□□□□ 0.42
TLR9Q9NR96 CETN4P-206ENST00000642099 2168 ntBASIC17.67■□□□□ 0.42
TLR9Q9NR96 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TLR9Q9NR96 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.67■□□□□ 0.42
TLR9Q9NR96 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TLR9Q9NR96 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TLR9Q9NR96 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TLR9Q9NR96 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TLR9Q9NR96 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
TLR9Q9NR96 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
TLR9Q9NR96 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TLR9Q9NR96 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
TLR9Q9NR96 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TLR9Q9NR96 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TLR9Q9NR96 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC17.67■□□□□ 0.42
TLR9Q9NR96 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC17.67■□□□□ 0.42
TLR9Q9NR96 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TLR9Q9NR96 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC17.67■□□□□ 0.42
TLR9Q9NR96 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.67■□□□□ 0.42
TLR9Q9NR96 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TLR9Q9NR96 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TLR9Q9NR96 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.67■□□□□ 0.42
TLR9Q9NR96 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TLR9Q9NR96 AC087499.5-201ENST00000452760 1342 ntBASIC17.67■□□□□ 0.42
TLR9Q9NR96 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.67■□□□□ 0.42
TLR9Q9NR96 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.67■□□□□ 0.42
TLR9Q9NR96 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TLR9Q9NR96 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TLR9Q9NR96 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TLR9Q9NR96 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.66■□□□□ 0.42
TLR9Q9NR96 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.66■□□□□ 0.42
TLR9Q9NR96 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TLR9Q9NR96 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TLR9Q9NR96 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TLR9Q9NR96 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.66■□□□□ 0.42
TLR9Q9NR96 MTND6P24-201ENST00000440466 518 ntBASIC17.66■□□□□ 0.42
TLR9Q9NR96 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TLR9Q9NR96 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC17.66■□□□□ 0.42
TLR9Q9NR96 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC17.66■□□□□ 0.42
TLR9Q9NR96 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TLR9Q9NR96 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC17.66■□□□□ 0.42
TLR9Q9NR96 AC009407.1-201ENST00000568958 598 ntBASIC17.66■□□□□ 0.42
TLR9Q9NR96 TP53TG3HP-202ENST00000569755 579 ntBASIC17.66■□□□□ 0.42
TLR9Q9NR96 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.66■□□□□ 0.42
TLR9Q9NR96 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.66■□□□□ 0.42
TLR9Q9NR96 AL132655.2-201ENST00000596276 594 ntBASIC17.66■□□□□ 0.42
TLR9Q9NR96 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.66■□□□□ 0.42
TLR9Q9NR96 AL589739.1-201ENST00000607720 493 ntBASIC17.66■□□□□ 0.42
TLR9Q9NR96 AC008738.7-201ENST00000609744 511 ntBASIC17.66■□□□□ 0.42
TLR9Q9NR96 MIR6799-201ENST00000620297 69 ntBASIC17.66■□□□□ 0.42
TLR9Q9NR96 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC17.66■□□□□ 0.42
TLR9Q9NR96 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TLR9Q9NR96 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TLR9Q9NR96 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.66■□□□□ 0.42
TLR9Q9NR96 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TLR9Q9NR96 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TLR9Q9NR96 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TLR9Q9NR96 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TLR9Q9NR96 HTR7P1-202ENST00000624664 4411 ntBASIC17.66■□□□□ 0.42
TLR9Q9NR96 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TLR9Q9NR96 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
TLR9Q9NR96 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.66■□□□□ 0.42
TLR9Q9NR96 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.65■□□□□ 0.42
TLR9Q9NR96 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TLR9Q9NR96 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
TLR9Q9NR96 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TLR9Q9NR96 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.65■□□□□ 0.42
TLR9Q9NR96 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TLR9Q9NR96 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TLR9Q9NR96 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TLR9Q9NR96 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.65■□□□□ 0.42
TLR9Q9NR96 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
TLR9Q9NR96 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
TLR9Q9NR96 FAM220BP-201ENST00000377689 816 ntBASIC17.65■□□□□ 0.42
TLR9Q9NR96 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC17.65■□□□□ 0.42
TLR9Q9NR96 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TLR9Q9NR96 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.65■□□□□ 0.42
TLR9Q9NR96 ATP5G2P4-201ENST00000442175 420 ntBASIC17.65■□□□□ 0.42
TLR9Q9NR96 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC17.65■□□□□ 0.42
TLR9Q9NR96 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC17.65■□□□□ 0.42
TLR9Q9NR96 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC17.65■□□□□ 0.42
TLR9Q9NR96 AL606495.2-201ENST00000605867 535 ntBASIC17.65■□□□□ 0.42
TLR9Q9NR96 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TLR9Q9NR96 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC17.65■□□□□ 0.42
TLR9Q9NR96 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
TLR9Q9NR96 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms