Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RTN4Q9NQC3 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.9■□□□□ 0.78
RTN4Q9NQC3 KRT18P29-201ENST00000397031 1267 ntBASIC19.9■□□□□ 0.78
RTN4Q9NQC3 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.9■□□□□ 0.78
RTN4Q9NQC3 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.9■□□□□ 0.78
RTN4Q9NQC3 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.9■□□□□ 0.78
RTN4Q9NQC3 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.9■□□□□ 0.78
RTN4Q9NQC3 AC025580.1-201ENST00000559553 729 ntTSL 5 BASIC19.9■□□□□ 0.78
RTN4Q9NQC3 AC091489.1-201ENST00000563866 691 ntTSL 3 BASIC19.9■□□□□ 0.78
RTN4Q9NQC3 AL353719.1-201ENST00000566847 864 ntBASIC19.9■□□□□ 0.78
RTN4Q9NQC3 AC079414.2-201ENST00000567157 1104 ntBASIC19.9■□□□□ 0.78
RTN4Q9NQC3 AC233702.5-201ENST00000584107 538 ntBASIC19.9■□□□□ 0.78
RTN4Q9NQC3 AL049637.2-201ENST00000641778 930 ntBASIC19.9■□□□□ 0.78
RTN4Q9NQC3 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC19.9■□□□□ 0.78
RTN4Q9NQC3 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
RTN4Q9NQC3 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
RTN4Q9NQC3 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RTN4Q9NQC3 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RTN4Q9NQC3 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC19.9■□□□□ 0.78
RTN4Q9NQC3 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RTN4Q9NQC3 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC19.9■□□□□ 0.78
RTN4Q9NQC3 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RTN4Q9NQC3 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
RTN4Q9NQC3 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC19.9■□□□□ 0.78
RTN4Q9NQC3 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC19.9■□□□□ 0.78
RTN4Q9NQC3 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RTN4Q9NQC3 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19.9■□□□□ 0.78
RTN4Q9NQC3 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.9■□□□□ 0.78
RTN4Q9NQC3 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RTN4Q9NQC3 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RTN4Q9NQC3 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC19.9■□□□□ 0.78
RTN4Q9NQC3 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
RTN4Q9NQC3 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
RTN4Q9NQC3 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
RTN4Q9NQC3 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.78
RTN4Q9NQC3 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
RTN4Q9NQC3 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
RTN4Q9NQC3 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
RTN4Q9NQC3 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
RTN4Q9NQC3 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RTN4Q9NQC3 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
RTN4Q9NQC3 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RTN4Q9NQC3 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.89■□□□□ 0.77
RTN4Q9NQC3 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RTN4Q9NQC3 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
RTN4Q9NQC3 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC19.89■□□□□ 0.77
RTN4Q9NQC3 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RTN4Q9NQC3 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.89■□□□□ 0.77
RTN4Q9NQC3 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RTN4Q9NQC3 AC012618.2-201ENST00000428058 849 ntBASIC19.89■□□□□ 0.77
RTN4Q9NQC3 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RTN4Q9NQC3 SBF1P1-201ENST00000444527 5631 ntBASIC19.89■□□□□ 0.77
RTN4Q9NQC3 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RTN4Q9NQC3 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.89■□□□□ 0.77
RTN4Q9NQC3 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RTN4Q9NQC3 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC19.89■□□□□ 0.77
RTN4Q9NQC3 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.89■□□□□ 0.77
RTN4Q9NQC3 AC067930.6-201ENST00000623257 4947 ntBASIC19.89■□□□□ 0.77
RTN4Q9NQC3 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC19.89■□□□□ 0.77
RTN4Q9NQC3 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RTN4Q9NQC3 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC19.89■□□□□ 0.77
RTN4Q9NQC3 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC19.89■□□□□ 0.77
RTN4Q9NQC3 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC19.89■□□□□ 0.77
RTN4Q9NQC3 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC19.88■□□□□ 0.77
RTN4Q9NQC3 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
RTN4Q9NQC3 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
RTN4Q9NQC3 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RTN4Q9NQC3 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC19.88■□□□□ 0.77
RTN4Q9NQC3 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RTN4Q9NQC3 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RTN4Q9NQC3 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.88■□□□□ 0.77
RTN4Q9NQC3 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RTN4Q9NQC3 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RTN4Q9NQC3 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.88■□□□□ 0.77
RTN4Q9NQC3 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RTN4Q9NQC3 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RTN4Q9NQC3 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RTN4Q9NQC3 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RTN4Q9NQC3 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RTN4Q9NQC3 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
RTN4Q9NQC3 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RTN4Q9NQC3 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
RTN4Q9NQC3 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.88■□□□□ 0.77
RTN4Q9NQC3 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RTN4Q9NQC3 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.88■□□□□ 0.77
RTN4Q9NQC3 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.88■□□□□ 0.77
RTN4Q9NQC3 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.88■□□□□ 0.77
RTN4Q9NQC3 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.88■□□□□ 0.77
RTN4Q9NQC3 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RTN4Q9NQC3 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RTN4Q9NQC3 AC104390.1-201ENST00000555663 520 ntBASIC19.88■□□□□ 0.77
RTN4Q9NQC3 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.88■□□□□ 0.77
RTN4Q9NQC3 AC142381.4-202ENST00000563973 229 ntBASIC19.88■□□□□ 0.77
RTN4Q9NQC3 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.88■□□□□ 0.77
RTN4Q9NQC3 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC19.88■□□□□ 0.77
RTN4Q9NQC3 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RTN4Q9NQC3 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC19.88■□□□□ 0.77
RTN4Q9NQC3 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RTN4Q9NQC3 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RTN4Q9NQC3 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms