Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC52A3Q9NQ40 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC52A3Q9NQ40 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC52A3Q9NQ40 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SLC52A3Q9NQ40 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SLC52A3Q9NQ40 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.86■□□□□ 0.13
SLC52A3Q9NQ40 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
SLC52A3Q9NQ40 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC52A3Q9NQ40 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
SLC52A3Q9NQ40 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.85■□□□□ 0.13
SLC52A3Q9NQ40 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC52A3Q9NQ40 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SLC52A3Q9NQ40 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC52A3Q9NQ40 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.85■□□□□ 0.13
SLC52A3Q9NQ40 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.85■□□□□ 0.13
SLC52A3Q9NQ40 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC52A3Q9NQ40 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
SLC52A3Q9NQ40 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC52A3Q9NQ40 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SLC52A3Q9NQ40 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
SLC52A3Q9NQ40 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.85■□□□□ 0.13
SLC52A3Q9NQ40 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
SLC52A3Q9NQ40 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC52A3Q9NQ40 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC52A3Q9NQ40 NUS1P2-201ENST00000417358 873 ntBASIC15.85■□□□□ 0.13
SLC52A3Q9NQ40 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
SLC52A3Q9NQ40 SLC25A6P2-201ENST00000497974 877 ntBASIC15.85■□□□□ 0.13
SLC52A3Q9NQ40 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC15.85■□□□□ 0.13
SLC52A3Q9NQ40 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.85■□□□□ 0.13
SLC52A3Q9NQ40 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.85■□□□□ 0.13
SLC52A3Q9NQ40 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.85■□□□□ 0.13
SLC52A3Q9NQ40 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC15.85■□□□□ 0.13
SLC52A3Q9NQ40 AC091167.2-201ENST00000579581 588 ntBASIC15.85■□□□□ 0.13
SLC52A3Q9NQ40 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC52A3Q9NQ40 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SLC52A3Q9NQ40 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.85■□□□□ 0.13
SLC52A3Q9NQ40 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.85■□□□□ 0.13
SLC52A3Q9NQ40 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC52A3Q9NQ40 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC52A3Q9NQ40 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SLC52A3Q9NQ40 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.85■□□□□ 0.13
SLC52A3Q9NQ40 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.85■□□□□ 0.13
SLC52A3Q9NQ40 IER3-202ENST00000376377 1350 ntBASIC15.85■□□□□ 0.13
SLC52A3Q9NQ40 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC52A3Q9NQ40 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
SLC52A3Q9NQ40 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
SLC52A3Q9NQ40 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC52A3Q9NQ40 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.84■□□□□ 0.13
SLC52A3Q9NQ40 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.84■□□□□ 0.13
SLC52A3Q9NQ40 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC52A3Q9NQ40 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC52A3Q9NQ40 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC52A3Q9NQ40 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC52A3Q9NQ40 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
SLC52A3Q9NQ40 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
SLC52A3Q9NQ40 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SLC52A3Q9NQ40 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.84■□□□□ 0.13
SLC52A3Q9NQ40 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
SLC52A3Q9NQ40 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.84■□□□□ 0.13
SLC52A3Q9NQ40 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC52A3Q9NQ40 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC15.84■□□□□ 0.13
SLC52A3Q9NQ40 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SLC52A3Q9NQ40 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.84■□□□□ 0.13
SLC52A3Q9NQ40 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.84■□□□□ 0.13
SLC52A3Q9NQ40 CYP2A7P1-201ENST00000595391 815 ntBASIC15.84■□□□□ 0.13
SLC52A3Q9NQ40 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC52A3Q9NQ40 BCL10-202ENST00000620248 774 ntTSL 5 BASIC15.84■□□□□ 0.13
SLC52A3Q9NQ40 AC069224.1-201ENST00000566372 1715 ntBASIC15.84■□□□□ 0.13
SLC52A3Q9NQ40 AC022532.1-201ENST00000624563 1728 ntBASIC15.84■□□□□ 0.13
SLC52A3Q9NQ40 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.84■□□□□ 0.13
SLC52A3Q9NQ40 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
SLC52A3Q9NQ40 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.84■□□□□ 0.13
SLC52A3Q9NQ40 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC15.84■□□□□ 0.13
SLC52A3Q9NQ40 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.84■□□□□ 0.13
SLC52A3Q9NQ40 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC52A3Q9NQ40 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC52A3Q9NQ40 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.84■□□□□ 0.13
SLC52A3Q9NQ40 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC52A3Q9NQ40 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC52A3Q9NQ40 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
SLC52A3Q9NQ40 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SLC52A3Q9NQ40 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.84■□□□□ 0.13
SLC52A3Q9NQ40 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SLC52A3Q9NQ40 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC52A3Q9NQ40 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC52A3Q9NQ40 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.84■□□□□ 0.13
SLC52A3Q9NQ40 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.83■□□□□ 0.13
SLC52A3Q9NQ40 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
SLC52A3Q9NQ40 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.83■□□□□ 0.13
SLC52A3Q9NQ40 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.83■□□□□ 0.13
SLC52A3Q9NQ40 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
SLC52A3Q9NQ40 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.83■□□□□ 0.13
SLC52A3Q9NQ40 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.13
SLC52A3Q9NQ40 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SLC52A3Q9NQ40 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.83■□□□□ 0.13
SLC52A3Q9NQ40 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.83■□□□□ 0.13
SLC52A3Q9NQ40 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
SLC52A3Q9NQ40 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SLC52A3Q9NQ40 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
SLC52A3Q9NQ40 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms