Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.09■□□□□ 0.17
PIF1Q9H611 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PIF1Q9H611 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PIF1Q9H611 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.09■□□□□ 0.17
PIF1Q9H611 AC005332.1-201ENST00000577698 1310 ntBASIC16.09■□□□□ 0.17
PIF1Q9H611 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PIF1Q9H611 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
PIF1Q9H611 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PIF1Q9H611 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PIF1Q9H611 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PIF1Q9H611 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PIF1Q9H611 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.09■□□□□ 0.17
PIF1Q9H611 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
PIF1Q9H611 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PIF1Q9H611 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.09■□□□□ 0.17
PIF1Q9H611 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
PIF1Q9H611 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PIF1Q9H611 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
PIF1Q9H611 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.08■□□□□ 0.17
PIF1Q9H611 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
PIF1Q9H611 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PIF1Q9H611 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.17
PIF1Q9H611 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.08■□□□□ 0.17
PIF1Q9H611 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
PIF1Q9H611 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PIF1Q9H611 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
PIF1Q9H611 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PIF1Q9H611 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PIF1Q9H611 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PIF1Q9H611 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.08■□□□□ 0.16
PIF1Q9H611 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PIF1Q9H611 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.08■□□□□ 0.16
PIF1Q9H611 KRT8P26-201ENST00000534154 1276 ntBASIC16.08■□□□□ 0.16
PIF1Q9H611 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.08■□□□□ 0.16
PIF1Q9H611 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.08■□□□□ 0.16
PIF1Q9H611 AC011498.5-201ENST00000592027 486 ntBASIC16.08■□□□□ 0.16
PIF1Q9H611 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PIF1Q9H611 AL353801.3-201ENST00000609898 542 ntBASIC16.08■□□□□ 0.16
PIF1Q9H611 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.08■□□□□ 0.16
PIF1Q9H611 AP000550.4-202ENST00000639755 178 ntBASIC16.08■□□□□ 0.16
PIF1Q9H611 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PIF1Q9H611 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.08■□□□□ 0.16
PIF1Q9H611 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PIF1Q9H611 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PIF1Q9H611 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PIF1Q9H611 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PIF1Q9H611 DBET-201ENST00000630918 3363 ntBASIC16.08■□□□□ 0.16
PIF1Q9H611 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PIF1Q9H611 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
PIF1Q9H611 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PIF1Q9H611 AC105917.1-201ENST00000506637 2539 ntBASIC16.08■□□□□ 0.16
PIF1Q9H611 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PIF1Q9H611 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PIF1Q9H611 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PIF1Q9H611 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PIF1Q9H611 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.08■□□□□ 0.16
PIF1Q9H611 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
PIF1Q9H611 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PIF1Q9H611 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.08■□□□□ 0.16
PIF1Q9H611 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PIF1Q9H611 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PIF1Q9H611 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
PIF1Q9H611 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.08■□□□□ 0.16
PIF1Q9H611 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PIF1Q9H611 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PIF1Q9H611 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.07■□□□□ 0.16
PIF1Q9H611 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PIF1Q9H611 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PIF1Q9H611 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PIF1Q9H611 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PIF1Q9H611 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
PIF1Q9H611 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PIF1Q9H611 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PIF1Q9H611 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
PIF1Q9H611 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PIF1Q9H611 ARMC10P1-201ENST00000313754 855 ntBASIC16.07■□□□□ 0.16
PIF1Q9H611 AC003669.1-201ENST00000334569 611 ntBASIC16.07■□□□□ 0.16
PIF1Q9H611 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PIF1Q9H611 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PIF1Q9H611 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PIF1Q9H611 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.07■□□□□ 0.16
PIF1Q9H611 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PIF1Q9H611 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.07■□□□□ 0.16
PIF1Q9H611 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.07■□□□□ 0.16
PIF1Q9H611 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.07■□□□□ 0.16
PIF1Q9H611 AC090616.6-201ENST00000582640 721 ntBASIC16.07■□□□□ 0.16
PIF1Q9H611 AL445228.2-201ENST00000605589 952 ntBASIC16.07■□□□□ 0.16
PIF1Q9H611 AC073592.5-201ENST00000624854 528 ntBASIC16.07■□□□□ 0.16
PIF1Q9H611 TUBB8P12-201ENST00000308911 1335 ntBASIC16.07■□□□□ 0.16
PIF1Q9H611 TUBB7P-202ENST00000428444 1305 ntBASIC16.07■□□□□ 0.16
PIF1Q9H611 TUBB8P7-204ENST00000567960 1332 ntBASIC16.07■□□□□ 0.16
PIF1Q9H611 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PIF1Q9H611 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PIF1Q9H611 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PIF1Q9H611 AC022188.1-201ENST00000620960 1664 ntBASIC16.07■□□□□ 0.16
PIF1Q9H611 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PIF1Q9H611 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
PIF1Q9H611 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.07■□□□□ 0.16
PIF1Q9H611 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.07■□□□□ 0.16
PIF1Q9H611 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms