Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LITAFQ99732 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
LITAFQ99732 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
LITAFQ99732 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
LITAFQ99732 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
LITAFQ99732 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LITAFQ99732 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LITAFQ99732 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC11.16□□□□□ -0.62
LITAFQ99732 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC11.16□□□□□ -0.62
LITAFQ99732 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC11.16□□□□□ -0.62
LITAFQ99732 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
LITAFQ99732 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC11.16□□□□□ -0.62
LITAFQ99732 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LITAFQ99732 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LITAFQ99732 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC11.16□□□□□ -0.62
LITAFQ99732 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC11.16□□□□□ -0.62
LITAFQ99732 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
LITAFQ99732 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LITAFQ99732 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC11.16□□□□□ -0.62
LITAFQ99732 RPS2P55-201ENST00000397318 883 ntBASIC11.16□□□□□ -0.62
LITAFQ99732 KRT18P48-201ENST00000434763 852 ntBASIC11.16□□□□□ -0.62
LITAFQ99732 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC11.16□□□□□ -0.62
LITAFQ99732 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC11.16□□□□□ -0.62
LITAFQ99732 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LITAFQ99732 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
LITAFQ99732 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC11.16□□□□□ -0.62
LITAFQ99732 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC11.16□□□□□ -0.62
LITAFQ99732 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC11.16□□□□□ -0.62
LITAFQ99732 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
LITAFQ99732 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC11.16□□□□□ -0.62
LITAFQ99732 AC007191.1-201ENST00000623179 2995 ntBASIC11.16□□□□□ -0.62
LITAFQ99732 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC11.16□□□□□ -0.62
LITAFQ99732 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC11.16□□□□□ -0.62
LITAFQ99732 FOS-208ENST00000555686 1496 ntTSL 2 BASIC11.16□□□□□ -0.62
LITAFQ99732 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
LITAFQ99732 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC11.16□□□□□ -0.62
LITAFQ99732 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
LITAFQ99732 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC11.16□□□□□ -0.62
LITAFQ99732 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LITAFQ99732 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LITAFQ99732 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
LITAFQ99732 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC11.16□□□□□ -0.62
LITAFQ99732 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
LITAFQ99732 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
LITAFQ99732 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC11.16□□□□□ -0.62
LITAFQ99732 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC11.16□□□□□ -0.62
LITAFQ99732 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC11.16□□□□□ -0.62
LITAFQ99732 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
LITAFQ99732 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LITAFQ99732 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
LITAFQ99732 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
LITAFQ99732 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC11.16□□□□□ -0.62
LITAFQ99732 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
LITAFQ99732 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
LITAFQ99732 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
LITAFQ99732 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
LITAFQ99732 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC11.16□□□□□ -0.62
LITAFQ99732 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
LITAFQ99732 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
LITAFQ99732 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC11.15□□□□□ -0.62
LITAFQ99732 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
LITAFQ99732 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
LITAFQ99732 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
LITAFQ99732 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC11.15□□□□□ -0.62
LITAFQ99732 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
LITAFQ99732 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
LITAFQ99732 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LITAFQ99732 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC11.15□□□□□ -0.62
LITAFQ99732 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC11.15□□□□□ -0.62
LITAFQ99732 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
LITAFQ99732 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
LITAFQ99732 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LITAFQ99732 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC11.15□□□□□ -0.62
LITAFQ99732 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
LITAFQ99732 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC11.15□□□□□ -0.62
LITAFQ99732 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LITAFQ99732 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.62
LITAFQ99732 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
LITAFQ99732 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC11.15□□□□□ -0.62
LITAFQ99732 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
LITAFQ99732 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC11.15□□□□□ -0.62
LITAFQ99732 AL391807.1-203ENST00000604392 2365 ntBASIC11.15□□□□□ -0.62
LITAFQ99732 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC11.15□□□□□ -0.62
LITAFQ99732 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LITAFQ99732 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LITAFQ99732 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
LITAFQ99732 Telomerase-vert.1-201ENST00000363312 438 ntBASIC11.15□□□□□ -0.62
LITAFQ99732 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LITAFQ99732 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC11.15□□□□□ -0.62
LITAFQ99732 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
LITAFQ99732 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC11.15□□□□□ -0.62
LITAFQ99732 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC11.15□□□□□ -0.62
LITAFQ99732 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC11.15□□□□□ -0.62
LITAFQ99732 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC11.15□□□□□ -0.62
LITAFQ99732 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC11.15□□□□□ -0.62
LITAFQ99732 AP003733.1-201ENST00000491725 852 ntBASIC11.15□□□□□ -0.62
LITAFQ99732 AC107956.1-201ENST00000494359 873 ntBASIC11.15□□□□□ -0.62
LITAFQ99732 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC11.15□□□□□ -0.62
LITAFQ99732 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC11.15□□□□□ -0.62
LITAFQ99732 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC11.15□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms