Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SYNGAP1Q96PV0 AC005034.1-201ENST00000426657 489 ntBASIC18.98■□□□□ 0.63
SYNGAP1Q96PV0 AC022494.1-201ENST00000466044 728 ntBASIC18.98■□□□□ 0.63
SYNGAP1Q96PV0 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SYNGAP1Q96PV0 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SYNGAP1Q96PV0 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SYNGAP1Q96PV0 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
SYNGAP1Q96PV0 RBM7-207ENST00000544582 692 ntTSL 3 BASIC18.98■□□□□ 0.63
SYNGAP1Q96PV0 LINC02560-201ENST00000596379 459 ntBASIC18.98■□□□□ 0.63
SYNGAP1Q96PV0 KRT8P49-201ENST00000604166 1432 ntBASIC18.98■□□□□ 0.63
SYNGAP1Q96PV0 AC021097.1-201ENST00000607902 574 ntBASIC18.98■□□□□ 0.63
SYNGAP1Q96PV0 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SYNGAP1Q96PV0 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
SYNGAP1Q96PV0 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SYNGAP1Q96PV0 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SYNGAP1Q96PV0 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.97■□□□□ 0.63
SYNGAP1Q96PV0 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SYNGAP1Q96PV0 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
SYNGAP1Q96PV0 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.97■□□□□ 0.63
SYNGAP1Q96PV0 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SYNGAP1Q96PV0 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
SYNGAP1Q96PV0 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
SYNGAP1Q96PV0 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SYNGAP1Q96PV0 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SYNGAP1Q96PV0 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SYNGAP1Q96PV0 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SYNGAP1Q96PV0 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SYNGAP1Q96PV0 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
SYNGAP1Q96PV0 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC18.97■□□□□ 0.63
SYNGAP1Q96PV0 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
SYNGAP1Q96PV0 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
SYNGAP1Q96PV0 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.97■□□□□ 0.63
SYNGAP1Q96PV0 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
SYNGAP1Q96PV0 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SYNGAP1Q96PV0 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
SYNGAP1Q96PV0 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SYNGAP1Q96PV0 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SYNGAP1Q96PV0 METTL26-204ENST00000397665 558 ntTSL 2 BASIC18.97■□□□□ 0.63
SYNGAP1Q96PV0 STARD13-205ENST00000439831 945 ntTSL 2 BASIC18.97■□□□□ 0.63
SYNGAP1Q96PV0 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC18.97■□□□□ 0.63
SYNGAP1Q96PV0 AL512638.1-201ENST00000457493 794 ntBASIC18.97■□□□□ 0.63
SYNGAP1Q96PV0 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC18.97■□□□□ 0.63
SYNGAP1Q96PV0 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.97■□□□□ 0.63
SYNGAP1Q96PV0 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC18.97■□□□□ 0.63
SYNGAP1Q96PV0 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC18.96■□□□□ 0.63
SYNGAP1Q96PV0 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.96■□□□□ 0.63
SYNGAP1Q96PV0 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SYNGAP1Q96PV0 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
SYNGAP1Q96PV0 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SYNGAP1Q96PV0 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SYNGAP1Q96PV0 AL021920.2-201ENST00000624828 1351 ntBASIC18.96■□□□□ 0.63
SYNGAP1Q96PV0 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
SYNGAP1Q96PV0 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.96■□□□□ 0.63
SYNGAP1Q96PV0 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
SYNGAP1Q96PV0 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SYNGAP1Q96PV0 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SYNGAP1Q96PV0 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SYNGAP1Q96PV0 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.96■□□□□ 0.63
SYNGAP1Q96PV0 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SYNGAP1Q96PV0 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC18.96■□□□□ 0.63
SYNGAP1Q96PV0 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC18.96■□□□□ 0.63
SYNGAP1Q96PV0 AC142381.1-201ENST00000426099 345 ntBASIC18.96■□□□□ 0.63
SYNGAP1Q96PV0 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SYNGAP1Q96PV0 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC18.96■□□□□ 0.63
SYNGAP1Q96PV0 AC105233.2-201ENST00000523697 349 ntBASIC18.96■□□□□ 0.63
SYNGAP1Q96PV0 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC18.96■□□□□ 0.63
SYNGAP1Q96PV0 AF228730.5-201ENST00000530288 346 ntBASIC18.96■□□□□ 0.63
SYNGAP1Q96PV0 AC005225.4-201ENST00000557330 545 ntBASIC18.96■□□□□ 0.63
SYNGAP1Q96PV0 AL138918.1-201ENST00000568306 659 ntBASIC18.96■□□□□ 0.63
SYNGAP1Q96PV0 MIR4453-201ENST00000584019 89 ntBASIC18.96■□□□□ 0.63
SYNGAP1Q96PV0 AC012645.4-201ENST00000610691 1061 ntBASIC18.96■□□□□ 0.63
SYNGAP1Q96PV0 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.96■□□□□ 0.63
SYNGAP1Q96PV0 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
SYNGAP1Q96PV0 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.95■□□□□ 0.62
SYNGAP1Q96PV0 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SYNGAP1Q96PV0 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SYNGAP1Q96PV0 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
SYNGAP1Q96PV0 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.95■□□□□ 0.62
SYNGAP1Q96PV0 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
SYNGAP1Q96PV0 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.95■□□□□ 0.62
SYNGAP1Q96PV0 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SYNGAP1Q96PV0 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
SYNGAP1Q96PV0 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.95■□□□□ 0.62
SYNGAP1Q96PV0 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SYNGAP1Q96PV0 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.95■□□□□ 0.62
SYNGAP1Q96PV0 LINC00895-201ENST00000629028 1637 ntBASIC18.95■□□□□ 0.62
SYNGAP1Q96PV0 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
SYNGAP1Q96PV0 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
SYNGAP1Q96PV0 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC18.95■□□□□ 0.62
SYNGAP1Q96PV0 NARF-206ENST00000457415 1668 ntTSL 5 BASIC18.95■□□□□ 0.62
SYNGAP1Q96PV0 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SYNGAP1Q96PV0 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SYNGAP1Q96PV0 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
SYNGAP1Q96PV0 LINC02012-201ENST00000608206 1725 ntBASIC18.95■□□□□ 0.62
SYNGAP1Q96PV0 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SYNGAP1Q96PV0 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SYNGAP1Q96PV0 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SYNGAP1Q96PV0 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.95■□□□□ 0.62
SYNGAP1Q96PV0 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC18.95■□□□□ 0.62
SYNGAP1Q96PV0 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms