Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.36■□□□□ 0.21
PDLIM5Q96HC4 AC020765.3-201ENST00000613051 740 ntBASIC16.36■□□□□ 0.21
PDLIM5Q96HC4 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
PDLIM5Q96HC4 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.36■□□□□ 0.21
PDLIM5Q96HC4 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PDLIM5Q96HC4 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.36■□□□□ 0.21
PDLIM5Q96HC4 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.36■□□□□ 0.21
PDLIM5Q96HC4 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDLIM5Q96HC4 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDLIM5Q96HC4 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.36■□□□□ 0.21
PDLIM5Q96HC4 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
PDLIM5Q96HC4 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDLIM5Q96HC4 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDLIM5Q96HC4 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PDLIM5Q96HC4 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.36■□□□□ 0.21
PDLIM5Q96HC4 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.36■□□□□ 0.21
PDLIM5Q96HC4 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDLIM5Q96HC4 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.36■□□□□ 0.21
PDLIM5Q96HC4 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.36■□□□□ 0.21
PDLIM5Q96HC4 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDLIM5Q96HC4 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.35■□□□□ 0.21
PDLIM5Q96HC4 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDLIM5Q96HC4 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.35■□□□□ 0.21
PDLIM5Q96HC4 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
PDLIM5Q96HC4 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.35■□□□□ 0.21
PDLIM5Q96HC4 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDLIM5Q96HC4 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.35■□□□□ 0.21
PDLIM5Q96HC4 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
PDLIM5Q96HC4 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PDLIM5Q96HC4 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDLIM5Q96HC4 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.35■□□□□ 0.21
PDLIM5Q96HC4 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.35■□□□□ 0.21
PDLIM5Q96HC4 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDLIM5Q96HC4 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PDLIM5Q96HC4 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDLIM5Q96HC4 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDLIM5Q96HC4 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDLIM5Q96HC4 AC026691.1-201ENST00000602502 2017 ntBASIC16.35■□□□□ 0.21
PDLIM5Q96HC4 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PDLIM5Q96HC4 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PDLIM5Q96HC4 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDLIM5Q96HC4 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDLIM5Q96HC4 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
PDLIM5Q96HC4 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDLIM5Q96HC4 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDLIM5Q96HC4 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.35■□□□□ 0.21
PDLIM5Q96HC4 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.35■□□□□ 0.21
PDLIM5Q96HC4 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PDLIM5Q96HC4 POU5F1P6-201ENST00000466990 990 ntBASIC16.35■□□□□ 0.21
PDLIM5Q96HC4 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDLIM5Q96HC4 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.35■□□□□ 0.21
PDLIM5Q96HC4 MIR3909-201ENST00000579518 119 ntBASIC16.35■□□□□ 0.21
PDLIM5Q96HC4 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
PDLIM5Q96HC4 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.35■□□□□ 0.21
PDLIM5Q96HC4 AL645728.2-201ENST00000641974 660 ntBASIC16.35■□□□□ 0.21
PDLIM5Q96HC4 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
PDLIM5Q96HC4 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PDLIM5Q96HC4 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PDLIM5Q96HC4 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDLIM5Q96HC4 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.35■□□□□ 0.21
PDLIM5Q96HC4 AL162727.3-201ENST00000635661 2787 ntBASIC16.35■□□□□ 0.21
PDLIM5Q96HC4 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PDLIM5Q96HC4 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDLIM5Q96HC4 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
PDLIM5Q96HC4 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PDLIM5Q96HC4 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.35■□□□□ 0.21
PDLIM5Q96HC4 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
PDLIM5Q96HC4 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDLIM5Q96HC4 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDLIM5Q96HC4 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDLIM5Q96HC4 PCDH8P1-201ENST00000428983 2773 ntBASIC16.34■□□□□ 0.21
PDLIM5Q96HC4 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDLIM5Q96HC4 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.34■□□□□ 0.21
PDLIM5Q96HC4 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.34■□□□□ 0.21
PDLIM5Q96HC4 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PDLIM5Q96HC4 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
PDLIM5Q96HC4 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDLIM5Q96HC4 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
PDLIM5Q96HC4 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.34■□□□□ 0.21
PDLIM5Q96HC4 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PDLIM5Q96HC4 PCGF3-213ENST00000620529 1899 ntBASIC16.34■□□□□ 0.21
PDLIM5Q96HC4 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDLIM5Q96HC4 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.34■□□□□ 0.21
PDLIM5Q96HC4 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDLIM5Q96HC4 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.34■□□□□ 0.21
PDLIM5Q96HC4 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.34■□□□□ 0.21
PDLIM5Q96HC4 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.34■□□□□ 0.21
PDLIM5Q96HC4 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.34■□□□□ 0.21
PDLIM5Q96HC4 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.34■□□□□ 0.21
PDLIM5Q96HC4 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.34■□□□□ 0.21
PDLIM5Q96HC4 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PDLIM5Q96HC4 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDLIM5Q96HC4 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.34■□□□□ 0.21
PDLIM5Q96HC4 AL513523.2-202ENST00000427283 2040 ntBASIC16.34■□□□□ 0.21
PDLIM5Q96HC4 CICP6-201ENST00000457191 2729 ntBASIC16.34■□□□□ 0.21
PDLIM5Q96HC4 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
PDLIM5Q96HC4 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PDLIM5Q96HC4 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDLIM5Q96HC4 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDLIM5Q96HC4 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms