Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.62■□□□□ 0.25
SCAMP4Q969E2 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SCAMP4Q969E2 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.62■□□□□ 0.25
SCAMP4Q969E2 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.62■□□□□ 0.25
SCAMP4Q969E2 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
SCAMP4Q969E2 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.62■□□□□ 0.25
SCAMP4Q969E2 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.62■□□□□ 0.25
SCAMP4Q969E2 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SCAMP4Q969E2 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.62■□□□□ 0.25
SCAMP4Q969E2 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SCAMP4Q969E2 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.62■□□□□ 0.25
SCAMP4Q969E2 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SCAMP4Q969E2 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.62■□□□□ 0.25
SCAMP4Q969E2 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SCAMP4Q969E2 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
SCAMP4Q969E2 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SCAMP4Q969E2 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SCAMP4Q969E2 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
SCAMP4Q969E2 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SCAMP4Q969E2 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SCAMP4Q969E2 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.61■□□□□ 0.25
SCAMP4Q969E2 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
SCAMP4Q969E2 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.61■□□□□ 0.25
SCAMP4Q969E2 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SCAMP4Q969E2 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SCAMP4Q969E2 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.61■□□□□ 0.25
SCAMP4Q969E2 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SCAMP4Q969E2 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.61■□□□□ 0.25
SCAMP4Q969E2 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SCAMP4Q969E2 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
SCAMP4Q969E2 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SCAMP4Q969E2 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SCAMP4Q969E2 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SCAMP4Q969E2 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SCAMP4Q969E2 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SCAMP4Q969E2 PMS2P4-201ENST00000412466 1052 ntBASIC16.61■□□□□ 0.25
SCAMP4Q969E2 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SCAMP4Q969E2 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SCAMP4Q969E2 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.61■□□□□ 0.25
SCAMP4Q969E2 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.61■□□□□ 0.25
SCAMP4Q969E2 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
SCAMP4Q969E2 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.61■□□□□ 0.25
SCAMP4Q969E2 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SCAMP4Q969E2 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.61■□□□□ 0.25
SCAMP4Q969E2 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.61■□□□□ 0.25
SCAMP4Q969E2 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.61■□□□□ 0.25
SCAMP4Q969E2 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.61■□□□□ 0.25
SCAMP4Q969E2 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SCAMP4Q969E2 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SCAMP4Q969E2 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SCAMP4Q969E2 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SCAMP4Q969E2 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SCAMP4Q969E2 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SCAMP4Q969E2 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.61■□□□□ 0.25
SCAMP4Q969E2 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SCAMP4Q969E2 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.61■□□□□ 0.25
SCAMP4Q969E2 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SCAMP4Q969E2 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SCAMP4Q969E2 KRT8P39-201ENST00000396270 1433 ntBASIC16.61■□□□□ 0.25
SCAMP4Q969E2 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SCAMP4Q969E2 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SCAMP4Q969E2 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.61■□□□□ 0.25
SCAMP4Q969E2 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.61■□□□□ 0.25
SCAMP4Q969E2 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SCAMP4Q969E2 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SCAMP4Q969E2 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SCAMP4Q969E2 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SCAMP4Q969E2 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SCAMP4Q969E2 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SCAMP4Q969E2 AC011676.5-201ENST00000624864 2660 ntBASIC16.6■□□□□ 0.25
SCAMP4Q969E2 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
SCAMP4Q969E2 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SCAMP4Q969E2 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SCAMP4Q969E2 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SCAMP4Q969E2 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SCAMP4Q969E2 AL355306.1-201ENST00000415580 579 ntBASIC16.6■□□□□ 0.25
SCAMP4Q969E2 AL671277.1-201ENST00000429656 993 ntBASIC16.6■□□□□ 0.25
SCAMP4Q969E2 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SCAMP4Q969E2 ADH5P3-201ENST00000433842 1137 ntBASIC16.6■□□□□ 0.25
SCAMP4Q969E2 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SCAMP4Q969E2 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SCAMP4Q969E2 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.6■□□□□ 0.25
SCAMP4Q969E2 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SCAMP4Q969E2 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.6■□□□□ 0.25
SCAMP4Q969E2 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
SCAMP4Q969E2 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SCAMP4Q969E2 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SCAMP4Q969E2 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SCAMP4Q969E2 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.6■□□□□ 0.25
SCAMP4Q969E2 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.6■□□□□ 0.25
SCAMP4Q969E2 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
SCAMP4Q969E2 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SCAMP4Q969E2 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.6■□□□□ 0.25
SCAMP4Q969E2 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
SCAMP4Q969E2 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.59■□□□□ 0.25
SCAMP4Q969E2 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.59■□□□□ 0.25
SCAMP4Q969E2 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SCAMP4Q969E2 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
SCAMP4Q969E2 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SCAMP4Q969E2 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms