Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP2A3Q93084 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ATP2A3Q93084 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
ATP2A3Q93084 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.69■□□□□ 0.42
ATP2A3Q93084 AL513480.1-201ENST00000451731 511 ntBASIC17.69■□□□□ 0.42
ATP2A3Q93084 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.69■□□□□ 0.42
ATP2A3Q93084 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
ATP2A3Q93084 AP000344.2-201ENST00000512987 629 ntBASIC17.69■□□□□ 0.42
ATP2A3Q93084 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.69■□□□□ 0.42
ATP2A3Q93084 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP2A3Q93084 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.69■□□□□ 0.42
ATP2A3Q93084 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
ATP2A3Q93084 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.69■□□□□ 0.42
ATP2A3Q93084 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.69■□□□□ 0.42
ATP2A3Q93084 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.69■□□□□ 0.42
ATP2A3Q93084 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
ATP2A3Q93084 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.69■□□□□ 0.42
ATP2A3Q93084 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
ATP2A3Q93084 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.69■□□□□ 0.42
ATP2A3Q93084 AC129492.6-201ENST00000611383 1305 ntBASIC17.69■□□□□ 0.42
ATP2A3Q93084 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP2A3Q93084 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ATP2A3Q93084 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.68■□□□□ 0.42
ATP2A3Q93084 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP2A3Q93084 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP2A3Q93084 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ATP2A3Q93084 LYSMD4-203ENST00000378904 2122 ntBASIC17.68■□□□□ 0.42
ATP2A3Q93084 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
ATP2A3Q93084 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP2A3Q93084 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.68■□□□□ 0.42
ATP2A3Q93084 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP2A3Q93084 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP2A3Q93084 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
ATP2A3Q93084 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP2A3Q93084 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.68■□□□□ 0.42
ATP2A3Q93084 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.68■□□□□ 0.42
ATP2A3Q93084 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP2A3Q93084 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ATP2A3Q93084 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.68■□□□□ 0.42
ATP2A3Q93084 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ATP2A3Q93084 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.68■□□□□ 0.42
ATP2A3Q93084 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.68■□□□□ 0.42
ATP2A3Q93084 AP002472.1-201ENST00000577490 586 ntBASIC17.68■□□□□ 0.42
ATP2A3Q93084 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.68■□□□□ 0.42
ATP2A3Q93084 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.68■□□□□ 0.42
ATP2A3Q93084 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ATP2A3Q93084 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ATP2A3Q93084 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ATP2A3Q93084 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP2A3Q93084 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP2A3Q93084 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP2A3Q93084 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP2A3Q93084 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.68■□□□□ 0.42
ATP2A3Q93084 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ATP2A3Q93084 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP2A3Q93084 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP2A3Q93084 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP2A3Q93084 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP2A3Q93084 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP2A3Q93084 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
ATP2A3Q93084 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATP2A3Q93084 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.67■□□□□ 0.42
ATP2A3Q93084 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATP2A3Q93084 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.67■□□□□ 0.42
ATP2A3Q93084 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATP2A3Q93084 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
ATP2A3Q93084 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATP2A3Q93084 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATP2A3Q93084 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATP2A3Q93084 AC016396.2-201ENST00000562575 1417 ntBASIC17.67■□□□□ 0.42
ATP2A3Q93084 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
ATP2A3Q93084 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATP2A3Q93084 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ATP2A3Q93084 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ATP2A3Q93084 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATP2A3Q93084 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ATP2A3Q93084 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATP2A3Q93084 AC087163.2-201ENST00000457299 853 ntBASIC17.67■□□□□ 0.42
ATP2A3Q93084 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.67■□□□□ 0.42
ATP2A3Q93084 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
ATP2A3Q93084 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
ATP2A3Q93084 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
ATP2A3Q93084 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
ATP2A3Q93084 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.67■□□□□ 0.42
ATP2A3Q93084 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
ATP2A3Q93084 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.67■□□□□ 0.42
ATP2A3Q93084 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.67■□□□□ 0.42
ATP2A3Q93084 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
ATP2A3Q93084 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATP2A3Q93084 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
ATP2A3Q93084 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
ATP2A3Q93084 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.67■□□□□ 0.42
ATP2A3Q93084 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATP2A3Q93084 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ATP2A3Q93084 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ATP2A3Q93084 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ATP2A3Q93084 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ATP2A3Q93084 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
ATP2A3Q93084 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.66■□□□□ 0.42
ATP2A3Q93084 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms