Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATL1Q8WXF7 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATL1Q8WXF7 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATL1Q8WXF7 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.41■□□□□ 0.22
ATL1Q8WXF7 AP001005.1-201ENST00000571755 1248 ntBASIC16.41■□□□□ 0.22
ATL1Q8WXF7 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.41■□□□□ 0.22
ATL1Q8WXF7 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
ATL1Q8WXF7 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.41■□□□□ 0.22
ATL1Q8WXF7 AP001350.2-201ENST00000625104 1094 ntBASIC16.41■□□□□ 0.22
ATL1Q8WXF7 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
ATL1Q8WXF7 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.41■□□□□ 0.22
ATL1Q8WXF7 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATL1Q8WXF7 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATL1Q8WXF7 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATL1Q8WXF7 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ATL1Q8WXF7 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATL1Q8WXF7 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATL1Q8WXF7 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.41■□□□□ 0.22
ATL1Q8WXF7 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
ATL1Q8WXF7 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ATL1Q8WXF7 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.4■□□□□ 0.22
ATL1Q8WXF7 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATL1Q8WXF7 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.4■□□□□ 0.22
ATL1Q8WXF7 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.4■□□□□ 0.22
ATL1Q8WXF7 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.4■□□□□ 0.22
ATL1Q8WXF7 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATL1Q8WXF7 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
ATL1Q8WXF7 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATL1Q8WXF7 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATL1Q8WXF7 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATL1Q8WXF7 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATL1Q8WXF7 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATL1Q8WXF7 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.4■□□□□ 0.22
ATL1Q8WXF7 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.4■□□□□ 0.22
ATL1Q8WXF7 FLJ38576-201ENST00000623820 2459 ntBASIC16.4■□□□□ 0.22
ATL1Q8WXF7 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATL1Q8WXF7 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATL1Q8WXF7 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ATL1Q8WXF7 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.4■□□□□ 0.22
ATL1Q8WXF7 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
ATL1Q8WXF7 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.4■□□□□ 0.22
ATL1Q8WXF7 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
ATL1Q8WXF7 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ATL1Q8WXF7 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
ATL1Q8WXF7 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATL1Q8WXF7 AC092910.1-201ENST00000482027 1129 ntBASIC16.4■□□□□ 0.22
ATL1Q8WXF7 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.4■□□□□ 0.22
ATL1Q8WXF7 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.4■□□□□ 0.22
ATL1Q8WXF7 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.4■□□□□ 0.22
ATL1Q8WXF7 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.4■□□□□ 0.22
ATL1Q8WXF7 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.4■□□□□ 0.22
ATL1Q8WXF7 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.4■□□□□ 0.22
ATL1Q8WXF7 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.4■□□□□ 0.22
ATL1Q8WXF7 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.4■□□□□ 0.22
ATL1Q8WXF7 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.4■□□□□ 0.22
ATL1Q8WXF7 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.4■□□□□ 0.22
ATL1Q8WXF7 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.4■□□□□ 0.22
ATL1Q8WXF7 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.4■□□□□ 0.22
ATL1Q8WXF7 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.4■□□□□ 0.22
ATL1Q8WXF7 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
ATL1Q8WXF7 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.4■□□□□ 0.22
ATL1Q8WXF7 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.4■□□□□ 0.22
ATL1Q8WXF7 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATL1Q8WXF7 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
ATL1Q8WXF7 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
ATL1Q8WXF7 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATL1Q8WXF7 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATL1Q8WXF7 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATL1Q8WXF7 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATL1Q8WXF7 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATL1Q8WXF7 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.4■□□□□ 0.22
ATL1Q8WXF7 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ATL1Q8WXF7 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ATL1Q8WXF7 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATL1Q8WXF7 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.39■□□□□ 0.21
ATL1Q8WXF7 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.21
ATL1Q8WXF7 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.39■□□□□ 0.21
ATL1Q8WXF7 UBALD1-205ENST00000590891 2641 ntBASIC16.39■□□□□ 0.21
ATL1Q8WXF7 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ATL1Q8WXF7 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ATL1Q8WXF7 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
ATL1Q8WXF7 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.39■□□□□ 0.21
ATL1Q8WXF7 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATL1Q8WXF7 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.39■□□□□ 0.21
ATL1Q8WXF7 AL603756.1-201ENST00000606511 2163 ntBASIC16.39■□□□□ 0.21
ATL1Q8WXF7 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATL1Q8WXF7 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.39■□□□□ 0.21
ATL1Q8WXF7 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATL1Q8WXF7 PRSS29P-201ENST00000440800 595 ntBASIC16.39■□□□□ 0.21
ATL1Q8WXF7 AC108073.2-201ENST00000464002 357 ntBASIC16.39■□□□□ 0.21
ATL1Q8WXF7 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.39■□□□□ 0.21
ATL1Q8WXF7 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.39■□□□□ 0.21
ATL1Q8WXF7 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.39■□□□□ 0.21
ATL1Q8WXF7 AC010654.1-201ENST00000615722 808 ntBASIC16.39■□□□□ 0.21
ATL1Q8WXF7 AC117500.6-201ENST00000624871 588 ntBASIC16.39■□□□□ 0.21
ATL1Q8WXF7 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATL1Q8WXF7 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATL1Q8WXF7 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATL1Q8WXF7 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ATL1Q8WXF7 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms