Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CKAP2Q8WWK9 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CKAP2Q8WWK9 AC097637.2-201ENST00000624096 1997 ntBASIC16.69■□□□□ 0.26
CKAP2Q8WWK9 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CKAP2Q8WWK9 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CKAP2Q8WWK9 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.69■□□□□ 0.26
CKAP2Q8WWK9 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.69■□□□□ 0.26
CKAP2Q8WWK9 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CKAP2Q8WWK9 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CKAP2Q8WWK9 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CKAP2Q8WWK9 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.69■□□□□ 0.26
CKAP2Q8WWK9 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CKAP2Q8WWK9 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC16.69■□□□□ 0.26
CKAP2Q8WWK9 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CKAP2Q8WWK9 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CKAP2Q8WWK9 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC16.69■□□□□ 0.26
CKAP2Q8WWK9 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CKAP2Q8WWK9 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.69■□□□□ 0.26
CKAP2Q8WWK9 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.69■□□□□ 0.26
CKAP2Q8WWK9 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
CKAP2Q8WWK9 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CKAP2Q8WWK9 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.69■□□□□ 0.26
CKAP2Q8WWK9 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CKAP2Q8WWK9 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CKAP2Q8WWK9 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CKAP2Q8WWK9 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CKAP2Q8WWK9 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.69■□□□□ 0.26
CKAP2Q8WWK9 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.69■□□□□ 0.26
CKAP2Q8WWK9 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CKAP2Q8WWK9 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CKAP2Q8WWK9 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CKAP2Q8WWK9 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CKAP2Q8WWK9 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CKAP2Q8WWK9 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.68■□□□□ 0.26
CKAP2Q8WWK9 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CKAP2Q8WWK9 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CKAP2Q8WWK9 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CKAP2Q8WWK9 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CKAP2Q8WWK9 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.68■□□□□ 0.26
CKAP2Q8WWK9 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CKAP2Q8WWK9 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CKAP2Q8WWK9 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CKAP2Q8WWK9 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.68■□□□□ 0.26
CKAP2Q8WWK9 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.68■□□□□ 0.26
CKAP2Q8WWK9 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CKAP2Q8WWK9 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.68■□□□□ 0.26
CKAP2Q8WWK9 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.68■□□□□ 0.26
CKAP2Q8WWK9 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CKAP2Q8WWK9 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.68■□□□□ 0.26
CKAP2Q8WWK9 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.68■□□□□ 0.26
CKAP2Q8WWK9 AC005336.2-201ENST00000593183 939 ntBASIC16.68■□□□□ 0.26
CKAP2Q8WWK9 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.68■□□□□ 0.26
CKAP2Q8WWK9 AL353801.3-201ENST00000609898 542 ntBASIC16.68■□□□□ 0.26
CKAP2Q8WWK9 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CKAP2Q8WWK9 SNX33P1-201ENST00000592116 1762 ntBASIC16.68■□□□□ 0.26
CKAP2Q8WWK9 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CKAP2Q8WWK9 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CKAP2Q8WWK9 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CKAP2Q8WWK9 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.68■□□□□ 0.26
CKAP2Q8WWK9 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CKAP2Q8WWK9 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CKAP2Q8WWK9 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CKAP2Q8WWK9 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CKAP2Q8WWK9 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CKAP2Q8WWK9 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
CKAP2Q8WWK9 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.68■□□□□ 0.26
CKAP2Q8WWK9 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.68■□□□□ 0.26
CKAP2Q8WWK9 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CKAP2Q8WWK9 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.67■□□□□ 0.26
CKAP2Q8WWK9 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.67■□□□□ 0.26
CKAP2Q8WWK9 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.67■□□□□ 0.26
CKAP2Q8WWK9 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.67■□□□□ 0.26
CKAP2Q8WWK9 Z83836.1-201ENST00000624605 1642 ntBASIC16.67■□□□□ 0.26
CKAP2Q8WWK9 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.67■□□□□ 0.26
CKAP2Q8WWK9 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.67■□□□□ 0.26
CKAP2Q8WWK9 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CKAP2Q8WWK9 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CKAP2Q8WWK9 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CKAP2Q8WWK9 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CKAP2Q8WWK9 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.67■□□□□ 0.26
CKAP2Q8WWK9 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CKAP2Q8WWK9 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CKAP2Q8WWK9 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.67■□□□□ 0.26
CKAP2Q8WWK9 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CKAP2Q8WWK9 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CKAP2Q8WWK9 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CKAP2Q8WWK9 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.67■□□□□ 0.26
CKAP2Q8WWK9 RNF126P1-202ENST00000569893 925 ntBASIC16.67■□□□□ 0.26
CKAP2Q8WWK9 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.67■□□□□ 0.26
CKAP2Q8WWK9 AD001527.2-201ENST00000622994 785 ntBASIC16.67■□□□□ 0.26
CKAP2Q8WWK9 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CKAP2Q8WWK9 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.67■□□□□ 0.26
CKAP2Q8WWK9 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CKAP2Q8WWK9 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CKAP2Q8WWK9 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.67■□□□□ 0.26
CKAP2Q8WWK9 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CKAP2Q8WWK9 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CKAP2Q8WWK9 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.67■□□□□ 0.26
CKAP2Q8WWK9 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.67■□□□□ 0.26
CKAP2Q8WWK9 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms