Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.75■□□□□ 0.27
HMGB4Q8WW32 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
HMGB4Q8WW32 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
HMGB4Q8WW32 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HMGB4Q8WW32 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.75■□□□□ 0.27
HMGB4Q8WW32 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HMGB4Q8WW32 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HMGB4Q8WW32 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HMGB4Q8WW32 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
HMGB4Q8WW32 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
HMGB4Q8WW32 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HMGB4Q8WW32 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HMGB4Q8WW32 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HMGB4Q8WW32 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HMGB4Q8WW32 AC116353.5-201ENST00000638148 1699 ntBASIC16.75■□□□□ 0.27
HMGB4Q8WW32 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.75■□□□□ 0.27
HMGB4Q8WW32 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
HMGB4Q8WW32 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HMGB4Q8WW32 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HMGB4Q8WW32 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
HMGB4Q8WW32 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
HMGB4Q8WW32 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
HMGB4Q8WW32 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HMGB4Q8WW32 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.74■□□□□ 0.27
HMGB4Q8WW32 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.74■□□□□ 0.27
HMGB4Q8WW32 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HMGB4Q8WW32 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HMGB4Q8WW32 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HMGB4Q8WW32 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.74■□□□□ 0.27
HMGB4Q8WW32 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.74■□□□□ 0.27
HMGB4Q8WW32 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HMGB4Q8WW32 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.74■□□□□ 0.27
HMGB4Q8WW32 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.74■□□□□ 0.27
HMGB4Q8WW32 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HMGB4Q8WW32 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HMGB4Q8WW32 AP005018.1-201ENST00000525475 301 ntBASIC16.74■□□□□ 0.27
HMGB4Q8WW32 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HMGB4Q8WW32 MIR4492-201ENST00000581627 80 ntBASIC16.74■□□□□ 0.27
HMGB4Q8WW32 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.74■□□□□ 0.27
HMGB4Q8WW32 SPDYE12P-201ENST00000618416 771 ntBASIC16.74■□□□□ 0.27
HMGB4Q8WW32 AL590560.3-201ENST00000623350 461 ntBASIC16.74■□□□□ 0.27
HMGB4Q8WW32 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
HMGB4Q8WW32 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.74■□□□□ 0.27
HMGB4Q8WW32 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
HMGB4Q8WW32 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
HMGB4Q8WW32 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.74■□□□□ 0.27
HMGB4Q8WW32 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
HMGB4Q8WW32 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HMGB4Q8WW32 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HMGB4Q8WW32 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
HMGB4Q8WW32 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.74■□□□□ 0.27
HMGB4Q8WW32 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
HMGB4Q8WW32 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HMGB4Q8WW32 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HMGB4Q8WW32 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HMGB4Q8WW32 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HMGB4Q8WW32 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HMGB4Q8WW32 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
HMGB4Q8WW32 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMGB4Q8WW32 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
HMGB4Q8WW32 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMGB4Q8WW32 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.73■□□□□ 0.27
HMGB4Q8WW32 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMGB4Q8WW32 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.73■□□□□ 0.27
HMGB4Q8WW32 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
HMGB4Q8WW32 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.73■□□□□ 0.27
HMGB4Q8WW32 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.73■□□□□ 0.27
HMGB4Q8WW32 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMGB4Q8WW32 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.73■□□□□ 0.27
HMGB4Q8WW32 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMGB4Q8WW32 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMGB4Q8WW32 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMGB4Q8WW32 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMGB4Q8WW32 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
HMGB4Q8WW32 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.73■□□□□ 0.27
HMGB4Q8WW32 GAPDHP21-201ENST00000450301 1010 ntBASIC16.73■□□□□ 0.27
HMGB4Q8WW32 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.73■□□□□ 0.27
HMGB4Q8WW32 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.73■□□□□ 0.27
HMGB4Q8WW32 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
HMGB4Q8WW32 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.73■□□□□ 0.27
HMGB4Q8WW32 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMGB4Q8WW32 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMGB4Q8WW32 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
HMGB4Q8WW32 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMGB4Q8WW32 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMGB4Q8WW32 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMGB4Q8WW32 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.73■□□□□ 0.27
HMGB4Q8WW32 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMGB4Q8WW32 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.73■□□□□ 0.27
HMGB4Q8WW32 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMGB4Q8WW32 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.73■□□□□ 0.27
HMGB4Q8WW32 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.73■□□□□ 0.27
HMGB4Q8WW32 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.72■□□□□ 0.27
HMGB4Q8WW32 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.72■□□□□ 0.27
HMGB4Q8WW32 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HMGB4Q8WW32 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HMGB4Q8WW32 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HMGB4Q8WW32 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.72■□□□□ 0.27
HMGB4Q8WW32 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HMGB4Q8WW32 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms