Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SMIM4Q8WVI0 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SMIM4Q8WVI0 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.37□□□□□ -0.11
SMIM4Q8WVI0 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.37□□□□□ -0.11
SMIM4Q8WVI0 AC097637.2-201ENST00000624096 1997 ntBASIC14.37□□□□□ -0.11
SMIM4Q8WVI0 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMIM4Q8WVI0 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
SMIM4Q8WVI0 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC14.37□□□□□ -0.11
SMIM4Q8WVI0 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
SMIM4Q8WVI0 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC14.37□□□□□ -0.11
SMIM4Q8WVI0 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC14.37□□□□□ -0.11
SMIM4Q8WVI0 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC14.37□□□□□ -0.11
SMIM4Q8WVI0 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.37□□□□□ -0.11
SMIM4Q8WVI0 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.37□□□□□ -0.11
SMIM4Q8WVI0 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.37□□□□□ -0.11
SMIM4Q8WVI0 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SMIM4Q8WVI0 FOS-208ENST00000555686 1496 ntTSL 2 BASIC14.37□□□□□ -0.11
SMIM4Q8WVI0 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.37□□□□□ -0.11
SMIM4Q8WVI0 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
SMIM4Q8WVI0 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.37□□□□□ -0.11
SMIM4Q8WVI0 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.37□□□□□ -0.11
SMIM4Q8WVI0 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMIM4Q8WVI0 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
SMIM4Q8WVI0 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SMIM4Q8WVI0 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.36□□□□□ -0.11
SMIM4Q8WVI0 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SMIM4Q8WVI0 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.36□□□□□ -0.11
SMIM4Q8WVI0 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMIM4Q8WVI0 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMIM4Q8WVI0 NORAD-201ENST00000565493 5339 ntBASIC14.36□□□□□ -0.11
SMIM4Q8WVI0 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.36□□□□□ -0.11
SMIM4Q8WVI0 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.36□□□□□ -0.11
SMIM4Q8WVI0 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
SMIM4Q8WVI0 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMIM4Q8WVI0 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMIM4Q8WVI0 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
SMIM4Q8WVI0 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.36□□□□□ -0.11
SMIM4Q8WVI0 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMIM4Q8WVI0 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMIM4Q8WVI0 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SMIM4Q8WVI0 AC003669.1-201ENST00000334569 611 ntBASIC14.36□□□□□ -0.11
SMIM4Q8WVI0 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC14.36□□□□□ -0.11
SMIM4Q8WVI0 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMIM4Q8WVI0 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC14.36□□□□□ -0.11
SMIM4Q8WVI0 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMIM4Q8WVI0 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
SMIM4Q8WVI0 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
SMIM4Q8WVI0 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
SMIM4Q8WVI0 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
SMIM4Q8WVI0 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SMIM4Q8WVI0 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMIM4Q8WVI0 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.36□□□□□ -0.11
SMIM4Q8WVI0 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.36□□□□□ -0.11
SMIM4Q8WVI0 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
SMIM4Q8WVI0 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SMIM4Q8WVI0 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMIM4Q8WVI0 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
SMIM4Q8WVI0 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.36□□□□□ -0.11
SMIM4Q8WVI0 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SMIM4Q8WVI0 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SMIM4Q8WVI0 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMIM4Q8WVI0 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMIM4Q8WVI0 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.36□□□□□ -0.11
SMIM4Q8WVI0 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.36□□□□□ -0.11
SMIM4Q8WVI0 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMIM4Q8WVI0 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM4Q8WVI0 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM4Q8WVI0 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM4Q8WVI0 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM4Q8WVI0 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM4Q8WVI0 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM4Q8WVI0 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM4Q8WVI0 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
SMIM4Q8WVI0 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM4Q8WVI0 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SMIM4Q8WVI0 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
SMIM4Q8WVI0 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM4Q8WVI0 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM4Q8WVI0 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SMIM4Q8WVI0 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
SMIM4Q8WVI0 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC14.35□□□□□ -0.11
SMIM4Q8WVI0 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC14.35□□□□□ -0.11
SMIM4Q8WVI0 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM4Q8WVI0 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM4Q8WVI0 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC14.35□□□□□ -0.11
SMIM4Q8WVI0 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM4Q8WVI0 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM4Q8WVI0 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
SMIM4Q8WVI0 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC14.35□□□□□ -0.11
SMIM4Q8WVI0 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
SMIM4Q8WVI0 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SMIM4Q8WVI0 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SMIM4Q8WVI0 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.35□□□□□ -0.11
SMIM4Q8WVI0 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM4Q8WVI0 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM4Q8WVI0 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM4Q8WVI0 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM4Q8WVI0 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM4Q8WVI0 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
SMIM4Q8WVI0 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms