Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00346Q8IVM7 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00346Q8IVM7 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
LINC00346Q8IVM7 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
LINC00346Q8IVM7 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
LINC00346Q8IVM7 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
LINC00346Q8IVM7 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00346Q8IVM7 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00346Q8IVM7 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00346Q8IVM7 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00346Q8IVM7 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
LINC00346Q8IVM7 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00346Q8IVM7 HIST2H3DP1-201ENST00000401004 416 ntBASIC14.88□□□□□ -0.03
LINC00346Q8IVM7 PTCHD3P3-201ENST00000403073 906 ntBASIC14.88□□□□□ -0.03
LINC00346Q8IVM7 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
LINC00346Q8IVM7 RAB17-203ENST00000409576 466 ntTSL 3 BASIC14.88□□□□□ -0.03
LINC00346Q8IVM7 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC14.88□□□□□ -0.03
LINC00346Q8IVM7 KRT18P56-201ENST00000507275 550 ntBASIC14.88□□□□□ -0.03
LINC00346Q8IVM7 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.88□□□□□ -0.03
LINC00346Q8IVM7 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC14.88□□□□□ -0.03
LINC00346Q8IVM7 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC14.88□□□□□ -0.03
LINC00346Q8IVM7 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
LINC00346Q8IVM7 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
LINC00346Q8IVM7 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.88□□□□□ -0.03
LINC00346Q8IVM7 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00346Q8IVM7 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00346Q8IVM7 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00346Q8IVM7 AC006504.4-201ENST00000592118 1568 ntBASIC14.88□□□□□ -0.03
LINC00346Q8IVM7 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00346Q8IVM7 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
LINC00346Q8IVM7 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00346Q8IVM7 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC14.88□□□□□ -0.03
LINC00346Q8IVM7 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00346Q8IVM7 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00346Q8IVM7 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00346Q8IVM7 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00346Q8IVM7 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00346Q8IVM7 AC005052.1-201ENST00000625181 2492 ntBASIC14.88□□□□□ -0.03
LINC00346Q8IVM7 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
LINC00346Q8IVM7 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC14.88□□□□□ -0.03
LINC00346Q8IVM7 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00346Q8IVM7 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC14.88□□□□□ -0.03
LINC00346Q8IVM7 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00346Q8IVM7 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00346Q8IVM7 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC14.88□□□□□ -0.03
LINC00346Q8IVM7 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
LINC00346Q8IVM7 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00346Q8IVM7 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00346Q8IVM7 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00346Q8IVM7 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00346Q8IVM7 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00346Q8IVM7 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.87□□□□□ -0.03
LINC00346Q8IVM7 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00346Q8IVM7 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.87□□□□□ -0.03
LINC00346Q8IVM7 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00346Q8IVM7 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00346Q8IVM7 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00346Q8IVM7 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00346Q8IVM7 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00346Q8IVM7 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00346Q8IVM7 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00346Q8IVM7 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00346Q8IVM7 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
LINC00346Q8IVM7 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00346Q8IVM7 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00346Q8IVM7 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.87□□□□□ -0.03
LINC00346Q8IVM7 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00346Q8IVM7 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00346Q8IVM7 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00346Q8IVM7 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC14.87□□□□□ -0.03
LINC00346Q8IVM7 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00346Q8IVM7 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC14.87□□□□□ -0.03
LINC00346Q8IVM7 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
LINC00346Q8IVM7 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC14.87□□□□□ -0.03
LINC00346Q8IVM7 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.87□□□□□ -0.03
LINC00346Q8IVM7 CYGB-205ENST00000590175 830 ntTSL 3 BASIC14.87□□□□□ -0.03
LINC00346Q8IVM7 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00346Q8IVM7 ABBA01031661.1-201ENST00000634362 1253 ntBASIC14.87□□□□□ -0.03
LINC00346Q8IVM7 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00346Q8IVM7 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00346Q8IVM7 AC006277.1-201ENST00000624348 1610 ntBASIC14.87□□□□□ -0.03
LINC00346Q8IVM7 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00346Q8IVM7 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00346Q8IVM7 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00346Q8IVM7 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00346Q8IVM7 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00346Q8IVM7 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.87□□□□□ -0.03
LINC00346Q8IVM7 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00346Q8IVM7 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.87□□□□□ -0.03
LINC00346Q8IVM7 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00346Q8IVM7 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.86□□□□□ -0.03
LINC00346Q8IVM7 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.86□□□□□ -0.03
LINC00346Q8IVM7 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.86□□□□□ -0.03
LINC00346Q8IVM7 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00346Q8IVM7 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00346Q8IVM7 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00346Q8IVM7 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00346Q8IVM7 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.86□□□□□ -0.03
LINC00346Q8IVM7 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00346Q8IVM7 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms