Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC17.79■□□□□ 0.44
RNF135Q8IUD6 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.79■□□□□ 0.44
RNF135Q8IUD6 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RNF135Q8IUD6 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF135Q8IUD6 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.79■□□□□ 0.44
RNF135Q8IUD6 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.79■□□□□ 0.44
RNF135Q8IUD6 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF135Q8IUD6 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
RNF135Q8IUD6 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
RNF135Q8IUD6 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RNF135Q8IUD6 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.79■□□□□ 0.44
RNF135Q8IUD6 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RNF135Q8IUD6 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RNF135Q8IUD6 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.78■□□□□ 0.44
RNF135Q8IUD6 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.78■□□□□ 0.44
RNF135Q8IUD6 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.78■□□□□ 0.44
RNF135Q8IUD6 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.78■□□□□ 0.44
RNF135Q8IUD6 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF135Q8IUD6 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC17.78■□□□□ 0.44
RNF135Q8IUD6 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
RNF135Q8IUD6 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
RNF135Q8IUD6 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
RNF135Q8IUD6 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC17.78■□□□□ 0.44
RNF135Q8IUD6 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF135Q8IUD6 SPCS2P4-201ENST00000436160 681 ntBASIC17.78■□□□□ 0.44
RNF135Q8IUD6 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.78■□□□□ 0.44
RNF135Q8IUD6 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.78■□□□□ 0.44
RNF135Q8IUD6 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC17.78■□□□□ 0.44
RNF135Q8IUD6 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
RNF135Q8IUD6 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.78■□□□□ 0.44
RNF135Q8IUD6 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF135Q8IUD6 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
RNF135Q8IUD6 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
RNF135Q8IUD6 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF135Q8IUD6 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF135Q8IUD6 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF135Q8IUD6 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
RNF135Q8IUD6 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF135Q8IUD6 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF135Q8IUD6 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF135Q8IUD6 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC17.78■□□□□ 0.44
RNF135Q8IUD6 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF135Q8IUD6 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF135Q8IUD6 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
RNF135Q8IUD6 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.77■□□□□ 0.44
RNF135Q8IUD6 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
RNF135Q8IUD6 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.77■□□□□ 0.44
RNF135Q8IUD6 AKAP8P1-201ENST00000434743 1349 ntBASIC17.77■□□□□ 0.44
RNF135Q8IUD6 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
RNF135Q8IUD6 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF135Q8IUD6 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF135Q8IUD6 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF135Q8IUD6 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC17.77■□□□□ 0.44
RNF135Q8IUD6 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC17.77■□□□□ 0.44
RNF135Q8IUD6 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.77■□□□□ 0.44
RNF135Q8IUD6 SPDYE14P-201ENST00000442619 822 ntBASIC17.77■□□□□ 0.44
RNF135Q8IUD6 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.77■□□□□ 0.44
RNF135Q8IUD6 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RNF135Q8IUD6 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC17.77■□□□□ 0.44
RNF135Q8IUD6 RARRES2P8-201ENST00000566335 367 ntBASIC17.77■□□□□ 0.44
RNF135Q8IUD6 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF135Q8IUD6 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RNF135Q8IUD6 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF135Q8IUD6 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.77■□□□□ 0.43
RNF135Q8IUD6 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RNF135Q8IUD6 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RNF135Q8IUD6 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RNF135Q8IUD6 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
RNF135Q8IUD6 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.77■□□□□ 0.43
RNF135Q8IUD6 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RNF135Q8IUD6 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
RNF135Q8IUD6 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RNF135Q8IUD6 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RNF135Q8IUD6 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RNF135Q8IUD6 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF135Q8IUD6 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RNF135Q8IUD6 AC141586.5-201ENST00000624546 2050 ntBASIC17.76■□□□□ 0.43
RNF135Q8IUD6 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF135Q8IUD6 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.76■□□□□ 0.43
RNF135Q8IUD6 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF135Q8IUD6 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF135Q8IUD6 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF135Q8IUD6 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC17.76■□□□□ 0.43
RNF135Q8IUD6 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC17.76■□□□□ 0.43
RNF135Q8IUD6 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RNF135Q8IUD6 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
RNF135Q8IUD6 IGHV3-62-201ENST00000520057 340 ntBASIC17.76■□□□□ 0.43
RNF135Q8IUD6 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC17.76■□□□□ 0.43
RNF135Q8IUD6 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.76■□□□□ 0.43
RNF135Q8IUD6 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC17.76■□□□□ 0.43
RNF135Q8IUD6 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF135Q8IUD6 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
RNF135Q8IUD6 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.76■□□□□ 0.43
RNF135Q8IUD6 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF135Q8IUD6 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.76■□□□□ 0.43
RNF135Q8IUD6 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
RNF135Q8IUD6 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF135Q8IUD6 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.76■□□□□ 0.43
RNF135Q8IUD6 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF135Q8IUD6 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms