Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 KLF2P4-201ENST00000451959 1225 ntBASIC20.74■□□□□ 0.91
COL23A1Q86Y22 RHOA-206ENST00000454011 889 ntTSL 2 BASIC20.74■□□□□ 0.91
COL23A1Q86Y22 AC099548.2-209ENST00000480264 625 ntBASIC20.74■□□□□ 0.91
COL23A1Q86Y22 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
COL23A1Q86Y22 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC20.74■□□□□ 0.91
COL23A1Q86Y22 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC20.74■□□□□ 0.91
COL23A1Q86Y22 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
COL23A1Q86Y22 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
COL23A1Q86Y22 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC20.74■□□□□ 0.91
COL23A1Q86Y22 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
COL23A1Q86Y22 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC20.74■□□□□ 0.91
COL23A1Q86Y22 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
COL23A1Q86Y22 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COL23A1Q86Y22 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
COL23A1Q86Y22 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC20.74■□□□□ 0.91
COL23A1Q86Y22 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
COL23A1Q86Y22 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL23A1Q86Y22 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
COL23A1Q86Y22 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
COL23A1Q86Y22 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
COL23A1Q86Y22 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC20.73■□□□□ 0.91
COL23A1Q86Y22 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL23A1Q86Y22 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL23A1Q86Y22 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL23A1Q86Y22 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL23A1Q86Y22 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC20.73■□□□□ 0.91
COL23A1Q86Y22 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC20.73■□□□□ 0.91
COL23A1Q86Y22 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC20.73■□□□□ 0.91
COL23A1Q86Y22 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC20.73■□□□□ 0.91
COL23A1Q86Y22 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC20.73■□□□□ 0.91
COL23A1Q86Y22 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC20.73■□□□□ 0.91
COL23A1Q86Y22 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC20.73■□□□□ 0.91
COL23A1Q86Y22 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC20.73■□□□□ 0.91
COL23A1Q86Y22 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL23A1Q86Y22 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
COL23A1Q86Y22 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC20.73■□□□□ 0.91
COL23A1Q86Y22 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC20.73■□□□□ 0.91
COL23A1Q86Y22 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
COL23A1Q86Y22 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC20.73■□□□□ 0.91
COL23A1Q86Y22 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL23A1Q86Y22 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL23A1Q86Y22 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC20.72■□□□□ 0.91
COL23A1Q86Y22 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC20.72■□□□□ 0.91
COL23A1Q86Y22 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL23A1Q86Y22 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.72■□□□□ 0.91
COL23A1Q86Y22 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC20.72■□□□□ 0.91
COL23A1Q86Y22 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL23A1Q86Y22 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL23A1Q86Y22 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC20.72■□□□□ 0.91
COL23A1Q86Y22 LBX2-201ENST00000341396 886 ntTSL 3 BASIC20.72■□□□□ 0.91
COL23A1Q86Y22 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL23A1Q86Y22 DPM2-202ENST00000373110 738 ntTSL 2 BASIC20.72■□□□□ 0.91
COL23A1Q86Y22 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
COL23A1Q86Y22 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COL23A1Q86Y22 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC20.72■□□□□ 0.91
COL23A1Q86Y22 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
COL23A1Q86Y22 GOLGA2P4-201ENST00000441462 777 ntBASIC20.72■□□□□ 0.91
COL23A1Q86Y22 CSF2RBP1-201ENST00000447905 391 ntBASIC20.72■□□□□ 0.91
COL23A1Q86Y22 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL23A1Q86Y22 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC20.72■□□□□ 0.91
COL23A1Q86Y22 RARRES2P5-201ENST00000564013 466 ntBASIC20.72■□□□□ 0.91
COL23A1Q86Y22 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
COL23A1Q86Y22 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC20.72■□□□□ 0.91
COL23A1Q86Y22 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC20.72■□□□□ 0.91
COL23A1Q86Y22 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COL23A1Q86Y22 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
COL23A1Q86Y22 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
COL23A1Q86Y22 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL23A1Q86Y22 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
COL23A1Q86Y22 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
COL23A1Q86Y22 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COL23A1Q86Y22 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC20.72■□□□□ 0.91
COL23A1Q86Y22 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COL23A1Q86Y22 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC20.71■□□□□ 0.91
COL23A1Q86Y22 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
COL23A1Q86Y22 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL23A1Q86Y22 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL23A1Q86Y22 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL23A1Q86Y22 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
COL23A1Q86Y22 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
COL23A1Q86Y22 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC20.71■□□□□ 0.91
COL23A1Q86Y22 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC20.71■□□□□ 0.91
COL23A1Q86Y22 RNA5SP412-201ENST00000516234 123 ntBASIC20.71■□□□□ 0.91
COL23A1Q86Y22 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL23A1Q86Y22 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC20.71■□□□□ 0.91
COL23A1Q86Y22 AC024267.1-201ENST00000582320 895 ntBASIC20.71■□□□□ 0.91
COL23A1Q86Y22 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC20.71■□□□□ 0.91
COL23A1Q86Y22 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC20.71■□□□□ 0.91
COL23A1Q86Y22 RETN-203ENST00000629642 400 ntTSL 5 BASIC20.71■□□□□ 0.91
COL23A1Q86Y22 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL23A1Q86Y22 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL23A1Q86Y22 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
COL23A1Q86Y22 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC20.71■□□□□ 0.91
COL23A1Q86Y22 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL23A1Q86Y22 AC104581.1-202ENST00000635932 2618 ntBASIC20.71■□□□□ 0.91
COL23A1Q86Y22 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC20.7■□□□□ 0.91
COL23A1Q86Y22 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL23A1Q86Y22 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL23A1Q86Y22 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL23A1Q86Y22 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms