Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC18.65■□□□□ 0.58
TRIM50Q86XT4 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
TRIM50Q86XT4 AC069262.1-201ENST00000539058 672 ntBASIC18.65■□□□□ 0.58
TRIM50Q86XT4 AL512356.2-201ENST00000546955 174 ntBASIC18.65■□□□□ 0.58
TRIM50Q86XT4 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC18.65■□□□□ 0.58
TRIM50Q86XT4 SSH2-211ENST00000590153 570 ntTSL 4 BASIC18.65■□□□□ 0.58
TRIM50Q86XT4 AC008267.7-201ENST00000624570 1194 ntBASIC18.65■□□□□ 0.58
TRIM50Q86XT4 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC18.65■□□□□ 0.58
TRIM50Q86XT4 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM50Q86XT4 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC18.65■□□□□ 0.58
TRIM50Q86XT4 AC084121.4-201ENST00000641598 221 ntBASIC18.65■□□□□ 0.58
TRIM50Q86XT4 AF228730.8-201ENST00000642140 221 ntBASIC18.65■□□□□ 0.58
TRIM50Q86XT4 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM50Q86XT4 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM50Q86XT4 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC18.65■□□□□ 0.58
TRIM50Q86XT4 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.65■□□□□ 0.58
TRIM50Q86XT4 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM50Q86XT4 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM50Q86XT4 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM50Q86XT4 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM50Q86XT4 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.65■□□□□ 0.58
TRIM50Q86XT4 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.58
TRIM50Q86XT4 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.64■□□□□ 0.58
TRIM50Q86XT4 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.64■□□□□ 0.58
TRIM50Q86XT4 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.58
TRIM50Q86XT4 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC18.64■□□□□ 0.57
TRIM50Q86XT4 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.64■□□□□ 0.57
TRIM50Q86XT4 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM50Q86XT4 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.64■□□□□ 0.57
TRIM50Q86XT4 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM50Q86XT4 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM50Q86XT4 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.64■□□□□ 0.57
TRIM50Q86XT4 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM50Q86XT4 CALY-203ENST00000368558 825 ntTSL 5 BASIC18.64■□□□□ 0.57
TRIM50Q86XT4 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
TRIM50Q86XT4 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC18.64■□□□□ 0.57
TRIM50Q86XT4 CD81-202ENST00000381036 880 ntTSL 3 BASIC18.64■□□□□ 0.57
TRIM50Q86XT4 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.64■□□□□ 0.57
TRIM50Q86XT4 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC18.64■□□□□ 0.57
TRIM50Q86XT4 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC18.64■□□□□ 0.57
TRIM50Q86XT4 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC18.64■□□□□ 0.57
TRIM50Q86XT4 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC18.64■□□□□ 0.57
TRIM50Q86XT4 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM50Q86XT4 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC18.64■□□□□ 0.57
TRIM50Q86XT4 DUT-210ENST00000559935 569 ntTSL 3 BASIC18.64■□□□□ 0.57
TRIM50Q86XT4 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM50Q86XT4 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM50Q86XT4 AC092364.2-202ENST00000597012 1073 ntBASIC18.64■□□□□ 0.57
TRIM50Q86XT4 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC18.64■□□□□ 0.57
TRIM50Q86XT4 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM50Q86XT4 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.64■□□□□ 0.57
TRIM50Q86XT4 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
TRIM50Q86XT4 PCDHB17P-201ENST00000539533 2393 ntBASIC18.64■□□□□ 0.57
TRIM50Q86XT4 TUBB3P1-201ENST00000405796 1332 ntBASIC18.64■□□□□ 0.57
TRIM50Q86XT4 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC18.64■□□□□ 0.57
TRIM50Q86XT4 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM50Q86XT4 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM50Q86XT4 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM50Q86XT4 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM50Q86XT4 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM50Q86XT4 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM50Q86XT4 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM50Q86XT4 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM50Q86XT4 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM50Q86XT4 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM50Q86XT4 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
TRIM50Q86XT4 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM50Q86XT4 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM50Q86XT4 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM50Q86XT4 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM50Q86XT4 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM50Q86XT4 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM50Q86XT4 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM50Q86XT4 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.63■□□□□ 0.57
TRIM50Q86XT4 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM50Q86XT4 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM50Q86XT4 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC18.63■□□□□ 0.57
TRIM50Q86XT4 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.63■□□□□ 0.57
TRIM50Q86XT4 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM50Q86XT4 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM50Q86XT4 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC18.63■□□□□ 0.57
TRIM50Q86XT4 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM50Q86XT4 STARD13-205ENST00000439831 945 ntTSL 2 BASIC18.63■□□□□ 0.57
TRIM50Q86XT4 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC18.63■□□□□ 0.57
TRIM50Q86XT4 AC125807.1-201ENST00000483097 614 ntBASIC18.63■□□□□ 0.57
TRIM50Q86XT4 AC067863.1-201ENST00000494933 530 ntBASIC18.63■□□□□ 0.57
TRIM50Q86XT4 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
TRIM50Q86XT4 GATD1-206ENST00000526325 756 ntTSL 5 BASIC18.63■□□□□ 0.57
TRIM50Q86XT4 INO80C-206ENST00000586489 594 ntTSL 3 BASIC18.63■□□□□ 0.57
TRIM50Q86XT4 AL096865.1-201ENST00000606796 927 ntBASIC18.63■□□□□ 0.57
TRIM50Q86XT4 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC18.63■□□□□ 0.57
TRIM50Q86XT4 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM50Q86XT4 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
TRIM50Q86XT4 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM50Q86XT4 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
TRIM50Q86XT4 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM50Q86XT4 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM50Q86XT4 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM50Q86XT4 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM50Q86XT4 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms