Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LRRTM1Q86UE6 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LRRTM1Q86UE6 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
LRRTM1Q86UE6 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC14.6□□□□□ -0.07
LRRTM1Q86UE6 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC14.6□□□□□ -0.07
LRRTM1Q86UE6 AL020989.1-201ENST00000422979 469 ntBASIC14.6□□□□□ -0.07
LRRTM1Q86UE6 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC14.6□□□□□ -0.07
LRRTM1Q86UE6 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC14.6□□□□□ -0.07
LRRTM1Q86UE6 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC14.6□□□□□ -0.07
LRRTM1Q86UE6 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC14.6□□□□□ -0.07
LRRTM1Q86UE6 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC14.6□□□□□ -0.07
LRRTM1Q86UE6 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC14.6□□□□□ -0.07
LRRTM1Q86UE6 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
LRRTM1Q86UE6 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC14.6□□□□□ -0.07
LRRTM1Q86UE6 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
LRRTM1Q86UE6 INTS4P1-201ENST00000438455 1935 ntBASIC14.6□□□□□ -0.07
LRRTM1Q86UE6 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.6□□□□□ -0.07
LRRTM1Q86UE6 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
LRRTM1Q86UE6 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LRRTM1Q86UE6 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
LRRTM1Q86UE6 AC023824.1-201ENST00000562945 2975 ntBASIC14.6□□□□□ -0.07
LRRTM1Q86UE6 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
LRRTM1Q86UE6 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
LRRTM1Q86UE6 AC097637.2-201ENST00000624096 1997 ntBASIC14.6□□□□□ -0.07
LRRTM1Q86UE6 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.6□□□□□ -0.07
LRRTM1Q86UE6 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LRRTM1Q86UE6 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LRRTM1Q86UE6 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.59□□□□□ -0.07
LRRTM1Q86UE6 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.59□□□□□ -0.07
LRRTM1Q86UE6 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LRRTM1Q86UE6 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LRRTM1Q86UE6 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LRRTM1Q86UE6 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LRRTM1Q86UE6 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LRRTM1Q86UE6 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.59□□□□□ -0.07
LRRTM1Q86UE6 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LRRTM1Q86UE6 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
LRRTM1Q86UE6 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LRRTM1Q86UE6 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LRRTM1Q86UE6 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.59□□□□□ -0.07
LRRTM1Q86UE6 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.59□□□□□ -0.07
LRRTM1Q86UE6 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LRRTM1Q86UE6 GGT4P-201ENST00000623672 1708 ntBASIC14.59□□□□□ -0.07
LRRTM1Q86UE6 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LRRTM1Q86UE6 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
LRRTM1Q86UE6 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LRRTM1Q86UE6 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC14.59□□□□□ -0.07
LRRTM1Q86UE6 VENTXP7-201ENST00000475503 772 ntBASIC14.59□□□□□ -0.07
LRRTM1Q86UE6 AC063952.2-201ENST00000498792 1227 ntBASIC14.59□□□□□ -0.07
LRRTM1Q86UE6 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.59□□□□□ -0.07
LRRTM1Q86UE6 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
LRRTM1Q86UE6 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC14.59□□□□□ -0.07
LRRTM1Q86UE6 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC14.59□□□□□ -0.07
LRRTM1Q86UE6 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC14.59□□□□□ -0.07
LRRTM1Q86UE6 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.59□□□□□ -0.07
LRRTM1Q86UE6 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LRRTM1Q86UE6 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LRRTM1Q86UE6 SNX33P1-201ENST00000592116 1762 ntBASIC14.59□□□□□ -0.07
LRRTM1Q86UE6 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
LRRTM1Q86UE6 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LRRTM1Q86UE6 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
LRRTM1Q86UE6 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
LRRTM1Q86UE6 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LRRTM1Q86UE6 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LRRTM1Q86UE6 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.58□□□□□ -0.07
LRRTM1Q86UE6 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.58□□□□□ -0.07
LRRTM1Q86UE6 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
LRRTM1Q86UE6 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
LRRTM1Q86UE6 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.58□□□□□ -0.07
LRRTM1Q86UE6 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
LRRTM1Q86UE6 AC010491.1-201ENST00000563101 2797 ntBASIC14.58□□□□□ -0.07
LRRTM1Q86UE6 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
LRRTM1Q86UE6 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
LRRTM1Q86UE6 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LRRTM1Q86UE6 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.58□□□□□ -0.08
LRRTM1Q86UE6 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.58□□□□□ -0.08
LRRTM1Q86UE6 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.58□□□□□ -0.08
LRRTM1Q86UE6 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LRRTM1Q86UE6 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LRRTM1Q86UE6 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
LRRTM1Q86UE6 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LRRTM1Q86UE6 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
LRRTM1Q86UE6 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LRRTM1Q86UE6 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC14.58□□□□□ -0.08
LRRTM1Q86UE6 SPDYE21P-201ENST00000413323 827 ntBASIC14.58□□□□□ -0.08
LRRTM1Q86UE6 LINC00982-205ENST00000420957 435 ntBASIC14.58□□□□□ -0.08
LRRTM1Q86UE6 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC14.58□□□□□ -0.08
LRRTM1Q86UE6 ABR-204ENST00000543210 1049 ntTSL 2 BASIC14.58□□□□□ -0.08
LRRTM1Q86UE6 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC14.58□□□□□ -0.08
LRRTM1Q86UE6 ABR-217ENST00000572441 563 ntTSL 4 BASIC14.58□□□□□ -0.08
LRRTM1Q86UE6 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LRRTM1Q86UE6 RBM42-202ENST00000586618 771 ntTSL 3 BASIC14.58□□□□□ -0.08
LRRTM1Q86UE6 AP000867.4-201ENST00000641616 219 ntBASIC14.58□□□□□ -0.08
LRRTM1Q86UE6 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.58□□□□□ -0.08
LRRTM1Q86UE6 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LRRTM1Q86UE6 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC14.58□□□□□ -0.08
LRRTM1Q86UE6 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.58□□□□□ -0.08
LRRTM1Q86UE6 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
LRRTM1Q86UE6 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LRRTM1Q86UE6 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms