Protein–RNA interactions for Protein: Q86TM6

SYVN1, E3 ubiquitin-protein ligase synoviolin, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1Q86TM6 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.51■□□□□ 0.23
SYVN1Q86TM6 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.51■□□□□ 0.23
SYVN1Q86TM6 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SYVN1Q86TM6 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
SYVN1Q86TM6 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SYVN1Q86TM6 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SYVN1Q86TM6 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SYVN1Q86TM6 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
SYVN1Q86TM6 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SYVN1Q86TM6 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
SYVN1Q86TM6 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SYVN1Q86TM6 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SYVN1Q86TM6 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SYVN1Q86TM6 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SYVN1Q86TM6 UPF3AP3-201ENST00000420996 769 ntBASIC16.51■□□□□ 0.23
SYVN1Q86TM6 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.51■□□□□ 0.23
SYVN1Q86TM6 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.51■□□□□ 0.23
SYVN1Q86TM6 AC009947.1-201ENST00000444350 727 ntBASIC16.51■□□□□ 0.23
SYVN1Q86TM6 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
SYVN1Q86TM6 AC136632.2-201ENST00000512891 861 ntBASIC16.51■□□□□ 0.23
SYVN1Q86TM6 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.51■□□□□ 0.23
SYVN1Q86TM6 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.51■□□□□ 0.23
SYVN1Q86TM6 AL589182.2-201ENST00000619332 1049 ntBASIC16.51■□□□□ 0.23
SYVN1Q86TM6 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SYVN1Q86TM6 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.51■□□□□ 0.23
SYVN1Q86TM6 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.51■□□□□ 0.23
SYVN1Q86TM6 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
SYVN1Q86TM6 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SYVN1Q86TM6 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SYVN1Q86TM6 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.51■□□□□ 0.23
SYVN1Q86TM6 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SYVN1Q86TM6 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SYVN1Q86TM6 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SYVN1Q86TM6 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SYVN1Q86TM6 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
SYVN1Q86TM6 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SYVN1Q86TM6 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
SYVN1Q86TM6 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SYVN1Q86TM6 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.5■□□□□ 0.23
SYVN1Q86TM6 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SYVN1Q86TM6 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
SYVN1Q86TM6 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
SYVN1Q86TM6 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
SYVN1Q86TM6 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.5■□□□□ 0.23
SYVN1Q86TM6 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SYVN1Q86TM6 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
SYVN1Q86TM6 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SYVN1Q86TM6 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SYVN1Q86TM6 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SYVN1Q86TM6 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SYVN1Q86TM6 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.5■□□□□ 0.23
SYVN1Q86TM6 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.5■□□□□ 0.23
SYVN1Q86TM6 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.5■□□□□ 0.23
SYVN1Q86TM6 AC092183.1-201ENST00000469884 875 ntBASIC16.5■□□□□ 0.23
SYVN1Q86TM6 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.5■□□□□ 0.23
SYVN1Q86TM6 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.5■□□□□ 0.23
SYVN1Q86TM6 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SYVN1Q86TM6 MIR3687-2-201ENST00000577708 61 ntBASIC16.5■□□□□ 0.23
SYVN1Q86TM6 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.5■□□□□ 0.23
SYVN1Q86TM6 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.5■□□□□ 0.23
SYVN1Q86TM6 MIR3687-1-201ENST00000614492 61 ntBASIC16.5■□□□□ 0.23
SYVN1Q86TM6 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SYVN1Q86TM6 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.5■□□□□ 0.23
SYVN1Q86TM6 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SYVN1Q86TM6 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
SYVN1Q86TM6 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
SYVN1Q86TM6 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
SYVN1Q86TM6 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SYVN1Q86TM6 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.5■□□□□ 0.23
SYVN1Q86TM6 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
SYVN1Q86TM6 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
SYVN1Q86TM6 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SYVN1Q86TM6 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SYVN1Q86TM6 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SYVN1Q86TM6 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.5■□□□□ 0.23
SYVN1Q86TM6 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.5■□□□□ 0.23
SYVN1Q86TM6 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SYVN1Q86TM6 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
SYVN1Q86TM6 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SYVN1Q86TM6 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SYVN1Q86TM6 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
SYVN1Q86TM6 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.49■□□□□ 0.23
SYVN1Q86TM6 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SYVN1Q86TM6 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SYVN1Q86TM6 AL590787.1-201ENST00000568856 1315 ntBASIC16.49■□□□□ 0.23
SYVN1Q86TM6 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SYVN1Q86TM6 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SYVN1Q86TM6 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.49■□□□□ 0.23
SYVN1Q86TM6 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SYVN1Q86TM6 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SYVN1Q86TM6 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SYVN1Q86TM6 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SYVN1Q86TM6 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SYVN1Q86TM6 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SYVN1Q86TM6 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SYVN1Q86TM6 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
SYVN1Q86TM6 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SYVN1Q86TM6 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SYVN1Q86TM6 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.49■□□□□ 0.23
SYVN1Q86TM6 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms