Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
MRPL54Q6P161 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
MRPL54Q6P161 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
MRPL54Q6P161 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
MRPL54Q6P161 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC12.72□□□□□ -0.37
MRPL54Q6P161 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
MRPL54Q6P161 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
MRPL54Q6P161 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
MRPL54Q6P161 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
MRPL54Q6P161 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
MRPL54Q6P161 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
MRPL54Q6P161 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
MRPL54Q6P161 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
MRPL54Q6P161 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
MRPL54Q6P161 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
MRPL54Q6P161 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
MRPL54Q6P161 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
MRPL54Q6P161 AC097488.1-201ENST00000507834 756 ntBASIC12.72□□□□□ -0.37
MRPL54Q6P161 AC113404.2-201ENST00000507884 177 ntBASIC12.72□□□□□ -0.37
MRPL54Q6P161 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC12.72□□□□□ -0.37
MRPL54Q6P161 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC12.72□□□□□ -0.37
MRPL54Q6P161 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC12.72□□□□□ -0.37
MRPL54Q6P161 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
MRPL54Q6P161 DGCR10-201ENST00000609839 495 ntBASIC12.72□□□□□ -0.37
MRPL54Q6P161 AC133041.1-202ENST00000642053 222 ntBASIC12.72□□□□□ -0.37
MRPL54Q6P161 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC12.72□□□□□ -0.37
MRPL54Q6P161 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
MRPL54Q6P161 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
MRPL54Q6P161 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
MRPL54Q6P161 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC12.72□□□□□ -0.37
MRPL54Q6P161 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC12.72□□□□□ -0.37
MRPL54Q6P161 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
MRPL54Q6P161 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
MRPL54Q6P161 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
MRPL54Q6P161 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
MRPL54Q6P161 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
MRPL54Q6P161 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
MRPL54Q6P161 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
MRPL54Q6P161 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
MRPL54Q6P161 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
MRPL54Q6P161 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
MRPL54Q6P161 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC12.72□□□□□ -0.37
MRPL54Q6P161 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
MRPL54Q6P161 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
MRPL54Q6P161 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
MRPL54Q6P161 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
MRPL54Q6P161 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
MRPL54Q6P161 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
MRPL54Q6P161 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC12.71□□□□□ -0.37
MRPL54Q6P161 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC12.71□□□□□ -0.37
MRPL54Q6P161 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
MRPL54Q6P161 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC12.71□□□□□ -0.37
MRPL54Q6P161 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
MRPL54Q6P161 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
MRPL54Q6P161 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
MRPL54Q6P161 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
MRPL54Q6P161 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC12.71□□□□□ -0.37
MRPL54Q6P161 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
MRPL54Q6P161 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC12.71□□□□□ -0.37
MRPL54Q6P161 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC12.71□□□□□ -0.37
MRPL54Q6P161 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
MRPL54Q6P161 NCF1B-203ENST00000435988 1254 ntBASIC12.71□□□□□ -0.37
MRPL54Q6P161 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC12.71□□□□□ -0.37
MRPL54Q6P161 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC12.71□□□□□ -0.37
MRPL54Q6P161 AF186192.3-201ENST00000583427 947 ntBASIC12.71□□□□□ -0.37
MRPL54Q6P161 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
MRPL54Q6P161 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
MRPL54Q6P161 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC12.71□□□□□ -0.37
MRPL54Q6P161 AMT-206ENST00000458307 1860 ntTSL 2 BASIC12.71□□□□□ -0.37
MRPL54Q6P161 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
MRPL54Q6P161 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
MRPL54Q6P161 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
MRPL54Q6P161 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
MRPL54Q6P161 FRMD8P1-201ENST00000440433 1524 ntBASIC12.71□□□□□ -0.38
MRPL54Q6P161 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
MRPL54Q6P161 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
MRPL54Q6P161 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
MRPL54Q6P161 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
MRPL54Q6P161 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
MRPL54Q6P161 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
MRPL54Q6P161 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC12.71□□□□□ -0.38
MRPL54Q6P161 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
MRPL54Q6P161 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
MRPL54Q6P161 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
MRPL54Q6P161 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
MRPL54Q6P161 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
MRPL54Q6P161 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
MRPL54Q6P161 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
MRPL54Q6P161 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC12.7□□□□□ -0.38
MRPL54Q6P161 CNTNAP3P2-201ENST00000617175 3861 ntBASIC12.7□□□□□ -0.38
MRPL54Q6P161 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC12.7□□□□□ -0.38
MRPL54Q6P161 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
MRPL54Q6P161 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
MRPL54Q6P161 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
MRPL54Q6P161 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC12.7□□□□□ -0.38
MRPL54Q6P161 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
MRPL54Q6P161 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
MRPL54Q6P161 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
MRPL54Q6P161 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
MRPL54Q6P161 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms