Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.13■□□□□ 0.01
RTL6Q6ICC9 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RTL6Q6ICC9 AL355306.1-201ENST00000415580 579 ntBASIC15.13■□□□□ 0.01
RTL6Q6ICC9 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC15.13■□□□□ 0.01
RTL6Q6ICC9 AL671277.1-201ENST00000429656 993 ntBASIC15.13■□□□□ 0.01
RTL6Q6ICC9 HLA-J-203ENST00000494367 1087 ntBASIC15.13■□□□□ 0.01
RTL6Q6ICC9 KRT8P48-201ENST00000515599 1220 ntBASIC15.13■□□□□ 0.01
RTL6Q6ICC9 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC15.13■□□□□ 0.01
RTL6Q6ICC9 AC093520.2-201ENST00000561830 333 ntBASIC15.13■□□□□ 0.01
RTL6Q6ICC9 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RTL6Q6ICC9 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RTL6Q6ICC9 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RTL6Q6ICC9 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RTL6Q6ICC9 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
RTL6Q6ICC9 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RTL6Q6ICC9 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RTL6Q6ICC9 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
RTL6Q6ICC9 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.13■□□□□ 0.01
RTL6Q6ICC9 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
RTL6Q6ICC9 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RTL6Q6ICC9 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.13■□□□□ 0.01
RTL6Q6ICC9 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RTL6Q6ICC9 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.12■□□□□ 0.01
RTL6Q6ICC9 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RTL6Q6ICC9 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.12■□□□□ 0.01
RTL6Q6ICC9 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RTL6Q6ICC9 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RTL6Q6ICC9 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RTL6Q6ICC9 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RTL6Q6ICC9 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
RTL6Q6ICC9 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.12■□□□□ 0.01
RTL6Q6ICC9 PKD1P5-201ENST00000532415 10291 ntBASIC15.12■□□□□ 0.01
RTL6Q6ICC9 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RTL6Q6ICC9 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RTL6Q6ICC9 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RTL6Q6ICC9 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RTL6Q6ICC9 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
RTL6Q6ICC9 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RTL6Q6ICC9 AC099398.1-201ENST00000567919 2776 ntBASIC15.12■□□□□ 0.01
RTL6Q6ICC9 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RTL6Q6ICC9 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RTL6Q6ICC9 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RTL6Q6ICC9 HMGA1P7-201ENST00000406908 502 ntBASIC15.12■□□□□ 0.01
RTL6Q6ICC9 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.12■□□□□ 0.01
RTL6Q6ICC9 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.12■□□□□ 0.01
RTL6Q6ICC9 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
RTL6Q6ICC9 TIMM8BP1-201ENST00000452384 211 ntBASIC15.12■□□□□ 0.01
RTL6Q6ICC9 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
RTL6Q6ICC9 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.12■□□□□ 0.01
RTL6Q6ICC9 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.12■□□□□ 0.01
RTL6Q6ICC9 AC109322.1-201ENST00000524499 1264 ntBASIC15.12■□□□□ 0.01
RTL6Q6ICC9 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15.12■□□□□ 0.01
RTL6Q6ICC9 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.12■□□□□ 0.01
RTL6Q6ICC9 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.12■□□□□ 0.01
RTL6Q6ICC9 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.12■□□□□ 0.01
RTL6Q6ICC9 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.12■□□□□ 0.01
RTL6Q6ICC9 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.12■□□□□ 0.01
RTL6Q6ICC9 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
RTL6Q6ICC9 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.12■□□□□ 0.01
RTL6Q6ICC9 AC004449.1-201ENST00000564240 433 ntBASIC15.12■□□□□ 0.01
RTL6Q6ICC9 AC026120.1-201ENST00000611536 926 ntBASIC15.12■□□□□ 0.01
RTL6Q6ICC9 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.12■□□□□ 0.01
RTL6Q6ICC9 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RTL6Q6ICC9 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RTL6Q6ICC9 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
RTL6Q6ICC9 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RTL6Q6ICC9 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
RTL6Q6ICC9 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RTL6Q6ICC9 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.12■□□□□ 0.01
RTL6Q6ICC9 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RTL6Q6ICC9 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RTL6Q6ICC9 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
RTL6Q6ICC9 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
RTL6Q6ICC9 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.12■□□□□ 0.01
RTL6Q6ICC9 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.12■□□□□ 0.01
RTL6Q6ICC9 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.12■□□□□ 0.01
RTL6Q6ICC9 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
RTL6Q6ICC9 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
RTL6Q6ICC9 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
RTL6Q6ICC9 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RTL6Q6ICC9 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RTL6Q6ICC9 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RTL6Q6ICC9 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.11■□□□□ 0.01
RTL6Q6ICC9 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RTL6Q6ICC9 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RTL6Q6ICC9 AC016396.2-201ENST00000562575 1417 ntBASIC15.11■□□□□ 0.01
RTL6Q6ICC9 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RTL6Q6ICC9 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
RTL6Q6ICC9 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RTL6Q6ICC9 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RTL6Q6ICC9 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
RTL6Q6ICC9 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.11■□□□□ 0.01
RTL6Q6ICC9 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC15.11■□□□□ 0.01
RTL6Q6ICC9 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC15.11■□□□□ 0.01
RTL6Q6ICC9 AC023141.5-201ENST00000458585 616 ntBASIC15.11■□□□□ 0.01
RTL6Q6ICC9 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
RTL6Q6ICC9 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC15.11■□□□□ 0.01
RTL6Q6ICC9 DAD1-205ENST00000543337 501 ntTSL 3 BASIC15.11■□□□□ 0.01
RTL6Q6ICC9 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.11■□□□□ 0.01
RTL6Q6ICC9 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms