Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
EFNB3Q15768 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
EFNB3Q15768 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
EFNB3Q15768 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
EFNB3Q15768 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
EFNB3Q15768 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
EFNB3Q15768 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
EFNB3Q15768 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
EFNB3Q15768 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.12
EFNB3Q15768 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
EFNB3Q15768 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
EFNB3Q15768 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
EFNB3Q15768 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC14.27□□□□□ -0.12
EFNB3Q15768 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
EFNB3Q15768 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
EFNB3Q15768 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
EFNB3Q15768 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
EFNB3Q15768 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
EFNB3Q15768 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
EFNB3Q15768 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
EFNB3Q15768 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.27□□□□□ -0.13
EFNB3Q15768 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
EFNB3Q15768 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.27□□□□□ -0.13
EFNB3Q15768 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14.27□□□□□ -0.13
EFNB3Q15768 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
EFNB3Q15768 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.27□□□□□ -0.13
EFNB3Q15768 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.27□□□□□ -0.13
EFNB3Q15768 AL645939.2-201ENST00000427340 991 ntBASIC14.27□□□□□ -0.13
EFNB3Q15768 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.27□□□□□ -0.13
EFNB3Q15768 AC005237.2-201ENST00000434368 219 ntBASIC14.27□□□□□ -0.13
EFNB3Q15768 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.27□□□□□ -0.13
EFNB3Q15768 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.27□□□□□ -0.13
EFNB3Q15768 AP002490.2-201ENST00000524791 560 ntBASIC14.27□□□□□ -0.13
EFNB3Q15768 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
EFNB3Q15768 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
EFNB3Q15768 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.27□□□□□ -0.13
EFNB3Q15768 AC093520.2-201ENST00000561830 333 ntBASIC14.27□□□□□ -0.13
EFNB3Q15768 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.27□□□□□ -0.13
EFNB3Q15768 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.27□□□□□ -0.13
EFNB3Q15768 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
EFNB3Q15768 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
EFNB3Q15768 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC14.27□□□□□ -0.13
EFNB3Q15768 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
EFNB3Q15768 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
EFNB3Q15768 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
EFNB3Q15768 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
EFNB3Q15768 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
EFNB3Q15768 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
EFNB3Q15768 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
EFNB3Q15768 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
EFNB3Q15768 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.27□□□□□ -0.13
EFNB3Q15768 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.13
EFNB3Q15768 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
EFNB3Q15768 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC14.27□□□□□ -0.13
EFNB3Q15768 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC14.27□□□□□ -0.13
EFNB3Q15768 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
EFNB3Q15768 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
EFNB3Q15768 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
EFNB3Q15768 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
EFNB3Q15768 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
EFNB3Q15768 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
EFNB3Q15768 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC14.26□□□□□ -0.13
EFNB3Q15768 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
EFNB3Q15768 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
EFNB3Q15768 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
EFNB3Q15768 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.26□□□□□ -0.13
EFNB3Q15768 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC14.26□□□□□ -0.13
EFNB3Q15768 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
EFNB3Q15768 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.26□□□□□ -0.13
EFNB3Q15768 NF2-208ENST00000403435 2568 ntTSL 5 BASIC14.26□□□□□ -0.13
EFNB3Q15768 AC092053.1-201ENST00000605787 1936 ntBASIC14.26□□□□□ -0.13
EFNB3Q15768 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
EFNB3Q15768 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
EFNB3Q15768 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.26□□□□□ -0.13
EFNB3Q15768 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
EFNB3Q15768 SPCS2P4-201ENST00000436160 681 ntBASIC14.26□□□□□ -0.13
EFNB3Q15768 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.26□□□□□ -0.13
EFNB3Q15768 RFPL4AP1-201ENST00000530883 850 ntBASIC14.26□□□□□ -0.13
EFNB3Q15768 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.26□□□□□ -0.13
EFNB3Q15768 AC025678.2-201ENST00000562061 970 ntBASIC14.26□□□□□ -0.13
EFNB3Q15768 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.26□□□□□ -0.13
EFNB3Q15768 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
EFNB3Q15768 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
EFNB3Q15768 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
EFNB3Q15768 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
EFNB3Q15768 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
EFNB3Q15768 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
EFNB3Q15768 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC14.26□□□□□ -0.13
EFNB3Q15768 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
EFNB3Q15768 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
EFNB3Q15768 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
EFNB3Q15768 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC14.26□□□□□ -0.13
EFNB3Q15768 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
EFNB3Q15768 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
EFNB3Q15768 AC006277.1-201ENST00000624348 1610 ntBASIC14.26□□□□□ -0.13
EFNB3Q15768 LINC00895-201ENST00000629028 1637 ntBASIC14.26□□□□□ -0.13
EFNB3Q15768 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
EFNB3Q15768 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
EFNB3Q15768 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
EFNB3Q15768 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms